Pre_GI: BLASTP Hits

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Query: NC_008228:2068641:2081043 Pseudoalteromonas atlantica T6c, complete genome

Start: 2081043, End: 2081726, Length: 684

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007954:3171081:317202531720253172711687Shewanella denitrificans OS217, complete genomehypothetical protein2e-59228
NC_008321:3189974:321111632111163211829714Shewanella sp. MR-4, complete genomehypothetical protein4e-57221
NC_020541:2264521:229077722907772291463687Rhodanobacter sp. 2APBS1, complete genomeTIGR02453 family protein3e-51201
NC_015510:2907815:290853129085312909244714Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomehypothetical protein2e-26119
NC_013730:2799287:281407328140732814783711Spirosoma linguale DSM 74, complete genomehypothetical protein7e-21100
NC_013132:153163:175472175472176161690Chitinophaga pinensis DSM 2588, complete genomehypothetical protein2e-1892.4
NC_014323:4619344:464919546491954649890696Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein2e-1892.4
NC_016627:3815690:381722138172213817898678Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein1e-1273.2