Pre_GI: BLASTP Hits

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Query: NC_008228:1404126:1423440 Pseudoalteromonas atlantica T6c, complete genome

Start: 1423440, End: 1424645, Length: 1206

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015497:3739556:3755488375548837567111224Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein3e-88325
NC_011138:1374520:1384998138499813862391242Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein1e-78293
NC_008609:2643000:2650028265002826516471620Pelobacter propionicus DSM 2379, complete genomehypothetical protein3e-1790.1