Pre_GI: BLASTP Hits

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Query: NC_008228:1404126:1414690 Pseudoalteromonas atlantica T6c, complete genome

Start: 1414690, End: 1416183, Length: 1494

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015497:3739556:3759604375960437611001497Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeeight transmembrane protein EpsH0659
NC_018679:3197347:3213865321386532153371473Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completetransmembrane protein EpsH8e-84311
NC_014315:1956695:1956695195669519582751581Nitrosococcus watsoni C-113 chromosome, complete genomeexosortase 14e-55216
NC_004757:1926074:1941346194134619429261581Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein5e-51202
NC_013960:3326955:3329343332934333309861644Nitrosococcus halophilus Nc4 chromosome, complete genomeexosortase 13e-50199
NC_008789:1641774:1640204164020416417961593Halorhodospira halophila SL1, complete genomeeight transmembrane protein EpsH5e-47189
NC_007298:2568851:2594358259435825958751518Dechloromonas aromatica RCB, complete genomehypothetical protein2e-44181
NC_014910:755192:7821317821317837321602Alicycliphilus denitrificans BC chromosome, complete genomeexosortase 12e-36154
NC_015422:704500:7214587214587230591602Alicycliphilus denitrificans K601 chromosome, complete genomeexosortase 12e-36154
NC_020541:3156500:3213876321387632154441569Rhodanobacter sp. 2APBS1, complete genomeeight transmembrane protein EpsH, putative exosortase5e-36152
NC_007645:2779381:2816483281648328180001518Hahella chejuensis KCTC 2396, complete genomehypothetical protein3e-27123
NC_008740:1815743:1822430182243018239801551Marinobacter aquaeolei VT8, complete genomeeight transmembrane protein EpsH7e-24112
NC_014216:2027017:2034163203416320357671605Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeeight transmembrane protein EpsH5e-23109
NC_018868:1960542:1981816198181619833091494Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein1e-1791.7
NC_015554:817500:8269658269658283381374Alteromonas sp. SN2 chromosome, complete genomehypothetical protein3e-1790.5
NC_009483:2640403:270898327089832709816834Geobacter uraniireducens Rf4 chromosome, complete genometransmembrane protein EpsH3e-1480.5
NC_007517:1676604:1701614170161417031941581Geobacter metallireducens GS-15, complete genomehypothetical protein2e-1377.8
NC_014973:1992694:199586819958681996698831Geobacter sp. M18 chromosome, complete genomeeight transmembrane protein EpsH4e-1170.1
NC_014355:2321957:2344860234486023464041545Candidatus Nitrospira defluvii, complete genomehypothetical protein5e-1169.3
NC_008435:1215437:1244664124466412462861623Rhodopseudomonas palustris BisA53, complete genomeeight transmembrane protein EpsH2e-1067.8
NC_017506:1996652:2001875200187520032901416Marinobacter adhaerens HP15 chromosome, complete genomeeight transmembrane protein EpsH-like protein5e-0962.8
NC_007614:261588:263073263073263987915Nitrosospira multiformis ATCC 25196 chromosome 1, completehypothetical protein6e-0962.8
NC_015388:269301:3030153030153045201506Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeeight transmembrane protein EpsH8e-0962.4
NC_015222:1203465:121396012139601214850891Nitrosomonas sp. AL212 chromosome, complete genomeexosortase 22e-0860.8
NC_015572:427732:4434084434084450301623Methylomonas methanica MC09 chromosome, complete genomeEpsI family protein3e-0860.5
NC_015731:1299955:130704713070471307940894Nitrosomonas sp. Is79A3 chromosome, complete genomeexosortase 23e-0860.5
NC_020304:3751710:377030637703063771145840Desulfocapsa sulfexigens DSM 10523, complete genomeeight transmembrane protein EpsH, putative exosortase3e-0860.5
NC_012969:1931595:194399919439991944901903Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeexosortase 24e-0859.7
NC_015388:2434922:2437375243737524390151641Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeEpsI family protein9e-0858.9
NC_007947:2140000:216316421631642164051888Methylobacillus flagellatus KT, complete genomehypothetical protein8e-0858.9
NC_014972:322056:329839329839330681843Desulfobulbus propionicus DSM 2032 chromosome, complete genomeeight transmembrane protein EpsH3e-0757
NC_013194:963735:970651970651971562912Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeexosortase 25e-0756.6
NC_009952:3522370:3560203356020335618041602Dinoroseobacter shibae DFL 12, complete genometransmembrane exosortase1e-0655.5
NC_007517:2241104:224110422411042241961858Geobacter metallireducens GS-15, complete genomehypothetical protein1e-0655.1
NC_013194:963735:966913966913967818906Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeexosortase 22e-0654.3
NC_012968:1945614:196368819636881964599912Methylotenera mobilis JLW8, complete genomeexosortase 24e-0653.5
NC_012918:2850755:285489928548992855744846Geobacter sp. M21 chromosome, complete genometransmembrane protein EpsH5e-0653.1
NC_012489:652319:658175658175659044870Gemmatimonas aurantiaca T-27, complete genomehypothetical membrane protein6e-0652.8