Pre_GI: BLASTP Hits

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Query: NC_008228:1307943:1326404 Pseudoalteromonas atlantica T6c, complete genome

Start: 1326404, End: 1328806, Length: 2403

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008700:3692333:3708934370893437113182385Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein2e-180633
NC_005125:760721:7817437817437844992757Gloeobacter violaceus PCC 7421, complete genomehypothetical protein4e-41170
NC_013061:2288134:2304309230430923069812673Pedobacter heparinus DSM 2366, complete genomehypothetical protein2e-28128
NC_020156:903754:9161589161589186232466Nonlabens dokdonensis DSW-6, complete genomehypothetical protein1e-24115
NC_014371:177536:1775361775361801422607Prevotella melaninogenica ATCC 25845 chromosome chromosome II,hypothetical protein2e-1998.6
NC_015160:797780:8108828108828132242343Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein3e-1377.8
NC_015160:1961789:1969734196973419719862253Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein1e-1069.3