Pre_GI: BLASTP Hits

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Query: NC_008148:672608:682997 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 682997, End: 683902, Length: 906

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008782:3361850:336432533643253365302978Acidovorax sp. JS42, complete genomecobalamin biosynthesis protein CobD8e-1787.8
NC_013892:853366:866699866699867673975Xenorhabdus bovienii SS-2004 chromosome, complete genomecobalamin biosynthesis protein cbiB1e-1170.5
NC_012962:1827000:183203818320381832997960Photorhabdus asymbiotica, complete genomecobalamin biosynthesis protein cobd4e-1168.9
NC_012491:1263469:126987812698781270828951Brevibacillus brevis NBRC 100599, complete genomecobalamin biosynthesis protein2e-0963.2
NC_011296:1151346:115037211503721151349978Thermodesulfovibrio yellowstonii DSM 11347, complete genomecobalamin biosynthesis protein CobD4e-0962.4
NC_016627:4203775:420979642097964210749954Clostridium clariflavum DSM 19732 chromosome, complete genomecobalamin biosynthesis protein CobD5e-0962
NC_019903:1058657:107193710719371072902966Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,adenosylcobinamide-phosphate synthase8e-0858.2
NC_015437:1038476:104071810407181041683966Selenomonas sputigena ATCC 35185 chromosome, complete genomecobalamin biosynthesis protein CobD1e-0757.4
NC_018524:557666:562851562851563756906Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomecobD/Cbib family protein2e-0757
NC_016641:3173250:317791331779133178884972Paenibacillus terrae HPL-003 chromosome, complete genomecobalamin biosynthesis protein cobd2e-0756.6
NC_021182:1245692:124916912491691250125957Clostridium pasteurianum BC1, complete genomecobalamin biosynthesis protein CobD4e-0755.8
NC_014483:1376500:138088013808801381851972Paenibacillus polymyxa E681 chromosome, complete genomeCobalamin biosynthesis protein cobD5e-0755.5
NC_014622:1514416:151867815186781519649972Paenibacillus polymyxa SC2 chromosome, complete genomecobalamin biosynthesis protein cobd7e-0754.7
NC_009253:2927802:293205129320512932998948Desulfotomaculum reducens MI-1 chromosome, complete genomecobalamin biosynthesis protein CobD8e-0754.7
NC_014974:1076565:110312311031231103968846Thermus scotoductus SA-01 chromosome, complete genomecobalamin biosynthesis protein CobD1e-0653.9
NC_019673:967559:970326970326971288963Saccharothrix espanaensis DSM 44229 complete genomeCobalamin biosynthesis protein CobD2e-0653.5
NC_014210:4122514:412316941231694124056888Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,cobalamin biosynthesis protein CobD6e-0651.6