Pre_GI: BLASTP Hits

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Query: NC_008148:583030:589575 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 589575, End: 590945, Length: 1371

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016078:3130573:3140203314020331414981296Pelagibacterium halotolerans B2 chromosome, complete genomehypothetical protein2e-0860.8
NC_013960:1319349:1319349131934913207311383Nitrosococcus halophilus Nc4 chromosome, complete genomepolysaccharide biosynthesis protein1e-0758.5
NC_013166:961431:9721579721579734551299Kangiella koreensis DSM 16069, complete genomemulti antimicrobial extrusion protein MatE1e-0758.2
NC_013222:721384:7332927332927346411350Robiginitalea biformata HTCC2501, complete genomehypothetical protein5e-0756.2
NC_014966:431342:4433464433464445751230Vibrio vulnificus MO6-24/O chromosome II, complete sequencecapsular polysaccharide synthesis enzyme CpsJ membrane protein export of O-antigen and teichoic acid4e-0653.1
NC_005140:444353:4553884553884567551368Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical polysaccharide biosynthesis related protein5e-0652.8
NC_004460:1718088:1730087173008717314001314Vibrio vulnificus CMCP6 chromosome II, complete sequenceMembrane protein involved in the export of O-antigen and teichoic acid7e-0652.4