Pre_GI: BLASTP Hits

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Query: NC_008148:3024867:3040211 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 3040211, End: 3041257, Length: 1047

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012914:5618000:5645455564545556464801026Paenibacillus sp. JDR-2, complete genomeNMT1/THI5 like domain protein1e-35150
NC_013173:1712138:1712138171213817153653228Desulfomicrobium baculatum DSM 4028, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)5e-29128
NC_012914:5372712:5391435539143553924931059Paenibacillus sp. JDR-2, complete genomeNMT1/THI5 like domain protein9e-24111
NC_002678:7004370:7030549703054970315771029Mesorhizobium loti MAFF303099, complete genomehypothetical protein3e-22106
NC_014829:1475000:1480232148023214812601029Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeNMT1/THI5 like domain protein1e-21103
NC_007645:2049988:2049988204998820529873000Hahella chejuensis KCTC 2396, complete genomepredicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain5e-21102
NC_017192:1745114:1767625176762517705822958Arcobacter sp. L, complete genometwo-component sensor kinase3e-2099.8
NC_015276:1531159:1537840153784015388501011Marinomonas mediterranea MMB-1 chromosome, complete genomeNMT1/THI5-like domain-containing protein6e-1995.1
NC_014166:2149984:2171101217110121744753375Arcobacter nitrofigilis DSM 7299 chromosome, complete genomePAS/PAC sensor-containg diguanylate cyclase4e-1892.4
NC_009663:851143:8714898714898737562268Sulfurovum sp. NBC37-1, complete genomesignal transduction response regulator2e-1790.1
NC_003063:304962:331789331789332778990Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein6e-1788.6
NC_018644:137755:162386162386163333948Alpha proteobacterium HIMB59 chromosome, complete genomeNMT1/THI5 family protein2e-1687
NC_006361:2920028:2920028292002829210681041Nocardia farcinica IFM 10152, complete genomehypothetical protein8e-1684.7
NC_017192:1799000:1813625181362518168313207Arcobacter sp. L, complete genometwo-component sensor kinase1e-1584
NC_006138:656000:661717661717662688972Desulfotalea psychrophila LSv54, complete genomehypothetical protein6e-1582
NC_003030:1510000:1543715154371515447161002Clostridium acetobutylicum ATCC 824, complete genomeABC transporter, periplasmic binding component2e-1480.1
NC_020210:2133996:2182309218230921833401032Geobacillus sp. GHH01, complete genomeputative aliphatic sulfonate ABC transporter substrate-binding protein3e-1479.7
NC_013850:2357608:235760823576082358597990Klebsiella variicola At-22 chromosome, complete genomeNMT1/THI5 like domain protein3e-1479.7
NC_014306:3006028:303710930371093038047939Erwinia billingiae Eb661, complete genomenitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein7e-1478.2
NC_002696:2829002:2851390285139028523941005Caulobacter crescentus CB15, complete genomehypothetical protein2e-1273.6
NC_019974:1115553:117688711768871177852966Natronococcus occultus SP4, complete genomeABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component2e-1273.2
NC_014100:1144463:1144463114446311454641002Caulobacter segnis ATCC 21756 chromosome, complete genomeNMT1/THI5 like domain-containing protein9e-1271.2
NC_014147:1200984:120563112056311206614984Moraxella catarrhalis RH4 chromosome, complete genomeABC transporter substrate binding protein2e-1170.5
NC_009654:4624459:4635671463567146366811011Marinomonas sp. MWYL1, complete genomeNMT1/THI5-like domain-containing protein2e-1170.1
NC_013515:550464:553847553847554809963Streptobacillus moniliformis DSM 12112, complete genomeNMT1/THI5 like domain protein4e-1169.3
NC_014171:723155:7477697477697487701002Bacillus thuringiensis BMB171 chromosome, complete genomehydroxymethylpyrimidine-binding protein5e-1168.9
NC_005945:754517:7545177545177555181002Bacillus anthracis str. Sterne, complete genomeABC transporter, substrate-binding protein, putative2e-1067
NC_006138:1571878:1571045157104515720461002Desulfotalea psychrophila LSv54, complete genomehypothetical protein4e-1066.2
NC_013223:2609697:260969726096972610635939Desulfohalobium retbaense DSM 5692, complete genomeNMT1/THI5 like domain protein8e-1065.1
NC_020908:1920169:194223819422381943173936Octadecabacter arcticus 238, complete genomeNMT1/Thi5 family protein9e-1064.7
NC_013745:177700:177700177700178671972Haloterrigena turkmenica DSM 5511 plasmid pHTUR02, completeNMT1/THI5 like domain protein2e-0963.5
NC_017075:4259460:4279348427934842803911044Rubrivivax gelatinosus IL144, complete genomeNMT1/THI5 like domain-containing protein1e-0860.8
NC_007512:944941:9746059746059756331029Pelodictyon luteolum DSM 273, complete genomehypothetical protein4e-0859.3
NC_007512:1162949:1180368118036811813961029Pelodictyon luteolum DSM 273, complete genomehypothetical protein7e-0858.5
NC_015559:1478114:149684014968401497820981Marinomonas posidonica IVIA-Po-181 chromosome, complete genomehypothetical protein8e-0858.2
NC_014829:4565467:456697645669764567959984Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeABC transporter substrate-binding protein9e-0858.2
NC_014931:4985500:4997508499750849985421035Variovorax paradoxus EPS chromosome, complete genomeNMT1/THI5 like domain protein1e-0757.8
NC_005043:1143557:1156121115612111578961776Chlamydophila pneumoniae TW-183, complete genomeABC transporter4e-0756.2
NC_010572:1081236:1104013110401311050351023Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein4e-0756.2
NC_002491:1147169:1156824115682411585991776Chlamydophila pneumoniae J138, complete genomeABC transporter permease4e-0756.2
NC_000922:1147855:1160418116041811621931776Chlamydophila pneumoniae CWL029, complete genomeABC transporter permease4e-0756.2
NC_002179:904518:9092219092219109961776Chlamydophila pneumoniae AR39, complete genomeABC transporter, permease protein, putative4e-0756.2
NC_017285:913000:9163859163859181601776Chlamydophila pneumoniae LPCoLN chromosome, complete genomeABC transporter permease5e-0755.5