Pre_GI: BLASTP Hits

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Query: NC_008148:2498000:2542337 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 2542337, End: 2547193, Length: 4857

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013757:2706835:2706835270683527116794845Geodermatophilus obscurus DSM 43160, complete genomeNAD-glutamate dehydrogenase01757
NC_014311:2385666:2404620240462024095844965Ralstonia solanacearum PSI07 chromosome, complete genomeNAD-glutamate dehydrogenase (gdhB)01548
NC_014118:1331164:1331164133116413360024839Burkholderia sp. CCGE1002 chromosome chromosome 2, completeNAD-glutamate dehydrogenase01533
NC_007908:1600244:1622497162249716272694773Rhodoferax ferrireducens T118, complete genomeNAD-glutamate dehydrogenase01414
NC_019673:1384795:1384795138479513897624968Saccharothrix espanaensis DSM 44229 complete genomeNAD-specific glutamate dehydrogenase01411
NC_007492:3655545:3681251368125136861374887Pseudomonas fluorescens PfO-1, complete genomeNAD-glutamate dehydrogenase01380
NC_016944:1594608:1594608159460815994494842Vibrio cholerae IEC224 chromosome I, complete sequenceNAD-specific glutamate dehydrogenase01369
NC_016745:2229271:2256453225645322612884836Oceanimonas sp. GK1 chromosome, complete genomeNAD-glutamate dehydrogenase01368
NC_015145:2693749:2731765273176527366184854Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeglutamate dehydrogenase (NAD)01239
NC_010168:1373337:1392982139298213978624881Renibacterium salmoninarum ATCC 33209 chromosome, complete genomeNAD-specific glutamate dehydrogenase01231
NC_014550:2355500:2371385237138523761784794Arthrobacter arilaitensis Re117, complete genomeNAD-specific glutamate dehydrogenase01143
NC_015312:6357469:6352974635297463574824509Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeNAD-glutamate dehydrogenase01115
NC_010511:4258000:4290282429028242951234842Methylobacterium sp. 4-46 chromosome, complete genomeNAD-glutamate dehydrogenase01114
NC_012416:205925:2113742113742161074734Wolbachia sp. wRi, complete genomehypothetical protein01031
NC_002978:200878:2025332025332072574725Wolbachia endosymbiont of Drosophila melanogaster, complete genomehypothetical protein01025
NC_016887:221788:2353782353782387703393Nocardia cyriacigeorgica GUH-2, complete genomeputative NAD-specific glutamate dehydrogenase0995
NC_016913:83988:1010701010701058244755Rickettsia rickettsii str. Brazil chromosome, complete genomeNAD-specific glutamate dehydrogenase0985
NC_017042:1206000:1223332122333212280864755Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, completeNAD-specific glutamate dehydrogenase0985
NC_016050:1088223:1088223108822310929744752Rickettsia japonica YH, complete genomeNAD-specific glutamate dehydrogenase0980
NC_012026:415447:4301844301844347014518Anaplasma marginale str. Florida, complete genomeNAD-specific glutamate dehydrogenase0941
NC_014006:924417:9244179244179290844668Sphingobium japonicum UT26S chromosome 1, complete genomeNAD-specific glutamate dehydrogenase0914
NC_015594:214500:2315972315972362614665Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeNAD-glutamate dehydrogenase0905
NC_013939:1927424:1944105194410519487904686Deferribacter desulfuricans SSM1, complete genomeNAD-glutamate dehydrogenase0867
NC_014315:3207684:3214626321462632194104785Nitrosococcus watsoni C-113 chromosome, complete genomeNAD-glutamate dehydrogenase0798
NC_007484:3358000:3364313336431333690974785Nitrosococcus oceani ATCC 19707, complete genomeNAD-glutamate dehydrogenase0770
NC_008278:132000:1489721489721523013330Frankia alni ACN14a, complete genomeputative NAD-specific glutamate dehydrogenase (NAD-GDH)0746
NC_009483:1116385:1131916113191611348762961Geobacter uraniireducens Rf4 chromosome, complete genomeGlu/Leu/Phe/Val dehydrogenase3e-24115
NC_012918:1697860:1698680169868017016402961Geobacter sp. M21 chromosome, complete genomeglutamate dehydrogenase1e-21106
NC_014973:3151701:3166746316674631697062961Geobacter sp. M18 chromosome, complete genomeglutamate dehydrogenase2e-20103