Pre_GI: BLASTP Hits

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Query: NC_008148:1567703:1567703 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 1567703, End: 1568803, Length: 1101

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013947:5431741:5453971545397154550471077Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeABC-2 type transporter1e-34147
NC_019673:8057941:8069231806923180702741044Saccharothrix espanaensis DSM 44229 complete genomeABC-2 type transporter1e-31137
NC_015574:2322811:2341886234188623430701185Methanobacterium sp. SWAN-1 chromosome, complete genomeABC-2 type transporter3e-22106
NC_018868:3943088:396548739654873966470984Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeABC transporter5e-1892.4
NC_007509:1043602:1043602104360210446811080Burkholderia sp. 383 chromosome 3, complete sequenceABC efflux pump, inner membrane subunit3e-1583.2
NC_012997:2059092:2079530207953020806541125Teredinibacter turnerae T7901, complete genomeABC-2 type transporter3e-1582.8
NC_011883:1601552:1608075160807516092111137Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,ABC-2 type transporter3e-1479.7
NC_010162:7824878:7847939784793978489971059Sorangium cellulosum 'So ce 56', complete genomeputative integral membrane transport protein9e-1478.2
NC_002939:3108907:3110043311004331111731131Geobacter sulfurreducens PCA, complete genomehypothetical protein9e-1375.1
NC_015566:4547702:4570039457003945711541116Serratia sp. AS12 chromosome, complete genomeABC-2 type transporter9e-1374.7
NC_017098:1149145:1156365115636511575191155Spirochaeta africana DSM 8902 chromosome, complete genomemultidrug ABC transporter permease4e-1272.8
NC_007681:218921:2414322414322425591128Methanosphaera stadtmanae DSM 3091, complete genomeABC-type multidrug transport system, permease protein3e-1272.8
NC_013526:530212:544312544312545037726Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeABC-2 type transporter8e-1271.6
NC_016751:469289:4876044876044887491146Marinitoga piezophila KA3 chromosome, complete genomemultidrug ABC transporter permease9e-1271.6
NC_019942:686564:6910036910036922141212Aciduliprofundum sp. MAR08-339, complete genomeABC-type multidrug transport system, permease component2e-1067
NC_015474:72103:766907669077454765Pyrococcus sp. NA2 chromosome, complete genomedaunorubicin resistance membrane protein6e-1065.5
NC_015856:2646816:2649594264959426507451152Collimonas fungivorans Ter331 chromosome, complete genomemultidrug ABC transporter permease6e-1065.5
NC_014484:371500:379082379082379813732Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein1e-0964.7
NC_014364:3707311:3709170370917037102791110Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeABC-2 type transporter1e-0964.7
NC_015501:556994:5736525736525747671116Porphyromonas asaccharolytica DSM 20707 chromosome, completeABC-2 type transporter2e-0963.9
NC_016048:693416:710309710309711025717Oscillibacter valericigenes Sjm18-20, complete genomeputative ABC transporter permease protein4e-0962.8
NC_011027:1153592:1159054115905411602111158Chlorobaculum parvum NCIB 8327, complete genomeABC-2 type transporter2e-0860.5
NC_015574:1474967:149486814948681495620753Methanobacterium sp. SWAN-1 chromosome, complete genomedaunorubicin resistance ABC transporter, inner membrane subunit B3e-0859.7
NC_015216:1278706:1312670131267013139261257Methanobacterium sp. AL-21 chromosome, complete genomeABC-2 type transporter4e-0859.3
NC_011830:3369282:336928233692823370025744Desulfitobacterium hafniense DCB-2, complete genomeABC-2 type transporter8e-0858.5
NC_020164:89214:8921489214902991086Staphylococcus warneri SG1, complete genomehypothetical protein1e-0758.2
NC_008825:846916:867937867937868692756Methylibium petroleiphilum PM1, complete genomeputative transmembrane protein1e-0758.2
NC_009664:1569335:160826516082651609101837Kineococcus radiotolerans SRS30216, complete genomeABC-2 type transporter8e-0858.2
NC_011832:1148859:115521411552141155978765Candidatus Methanosphaerula palustris E1-9c, complete genomedaunorubicin resistance ABC transporter, inner membrane subunit B2e-0757.4
NC_016751:469289:4865624865624876111050Marinitoga piezophila KA3 chromosome, complete genomemultidrug ABC transporter permease2e-0757.4
NC_015216:652266:6696996696996709461248Methanobacterium sp. AL-21 chromosome, complete genomeABC-2 type transporter2e-0757.4
NC_009454:1577319:1577319157731915784281110Pelotomaculum thermopropionicum SI, complete genomeABC-type multidrug transport system, permease component2e-0756.6
NC_014831:866614:8740668740668753731308Thermaerobacter marianensis DSM 12885 chromosome, complete genomeABC-2 type transporter4e-0756.2
NC_012968:325529:337611337611338414804Methylotenera mobilis JLW8, complete genomeABC-2 type transporter5e-0755.5
NC_017030:572871:577197577197577958762Corallococcus coralloides DSM 2259 chromosome, complete genomeABC transporter permease7e-0755.1
NC_019673:1584739:159311315931131593967855Saccharothrix espanaensis DSM 44229 complete genomeABC-2 type transporter9e-0755.1
NC_014924:3334386:3335339333533933364331095Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeABC-2 type transporter1e-0654.7
NC_013510:2782240:280139728013972802263867Thermomonospora curvata DSM 43183, complete genomeABC-2 type transporter1e-0654.3
NC_014364:3707311:3708063370806337091661104Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeABC-2 type transporter2e-0653.9
NC_010506:2441944:246317224631722463945774Shewanella woodyi ATCC 51908, complete genomeABC-2 type transporter5e-0652.4
NC_014314:755166:760834760834761151318Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete9e-0651.6
NC_007759:2858240:2861146286114628623481203Syntrophus aciditrophicus SB, complete genomeexport ABC transporter permease protein9e-0651.6
NC_019792:3027515:303607230360723036989918Natronobacterium gregoryi SP2 chromosome, complete genomemultidrug ABC transporter permease1e-0551.6