Pre_GI: BLASTP Hits

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Query: NC_008146:5106775:5123770 Mycobacterium sp. MCS, complete genome

Start: 5123770, End: 5124198, Length: 429

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:5144433:516285351628535163281429Mycobacterium sp. KMS, complete genomeconserved hypothetical protein4e-78289
NC_009077:4810379:481161748116174812102486Mycobacterium sp. JLS, complete genomehypothetical protein5e-64242
NC_014814:1425500:142722114272211427685465Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein6e-63238
NC_009338:4869700:487565948756594876123465Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein2e-62237
NC_008595:3914463:393302339330233933448426Mycobacterium avium 104, complete genomehypothetical protein5e-52202
NC_017904:666285:676649676649677095447Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein4e-51199