Pre_GI: BLASTP Hits

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Query: NC_008146:5106775:5123023 Mycobacterium sp. MCS, complete genome

Start: 5123023, End: 5123694, Length: 672

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:5144433:516210651621065162777672Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family6e-86316
NC_009338:4869700:487490948749094875580672Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator2e-56218
NC_014814:1425500:142776414277641428435672Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator, TetR family8e-54209
NC_009077:4810379:481088848108884811559672Mycobacterium sp. JLS, complete genometranscriptional regulator, TetR family2e-51201
NC_008595:3914463:393352339335233934146624Mycobacterium avium 104, complete genometranscriptional regulator, TetR family protein3e-30132
NC_016947:666627:678092678092678634543Mycobacterium intracellulare MOTT-02 chromosome, complete genomeTetR family transcriptional regulator2e-29128
NC_021177:2139838:214324921432492143950702Streptomyces fulvissimus DSM 40593, complete genomeTetR-family regulatory protein4e-1685.1
NC_013929:8474195:849428584942858494716432Streptomyces scabiei 87.22 chromosome, complete genomeDNA-binding protein6e-0650.8