Pre_GI: BLASTP Hits

Some Help

Query: NC_008146:5106775:5121699 Mycobacterium sp. MCS, complete genome

Start: 5121699, End: 5122412, Length: 714

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:5144433:516078251607825161495714Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family2e-112404
NC_014814:1425500:142904814290481429740693Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator, TetR family2e-82305
NC_009338:4869700:487360448736044874296693Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator3e-82305
NC_016947:666627:683999683999684685687Mycobacterium intracellulare MOTT-02 chromosome, complete genomeTetR family transcriptional regulator9e-63239
NC_017904:666285:681900681900682535636Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator5e-62237
NC_008595:3914463:393480139348013935469669Mycobacterium avium 104, complete genomeputative transcriptional regulator3e-59228
NC_016887:1714664:175370917537091754389681Nocardia cyriacigeorgica GUH-2, complete genomeTetR family transcriptional regulator8e-50196
NC_018583:95388:111793111793112419627Gordonia sp. KTR9 plasmid pGKT3, complete sequenceTranscriptional regulator7e-47187
NC_013441:2788806:281724328172432817791549Gordonia bronchialis DSM 43247, complete genomeregulatory protein TetR8e-46183