Pre_GI: BLASTP Hits

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Query: NC_008146:5106775:5113098 Mycobacterium sp. MCS, complete genome

Start: 5113098, End: 5113295, Length: 198

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:5144433:515075651507565150953198Mycobacterium sp. KMS, complete genomeconserved hypothetical protein1e-30131
NC_014814:1425500:143383014338301434027198Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein2e-28124
NC_009077:4671417:467814746781474678344198Mycobacterium sp. JLS, complete genomehypothetical protein5e-27119
NC_008595:2252830:226954122695412269735195Mycobacterium avium 104, complete genomehypothetical protein6e-1682.8
NC_014168:994640:101738210173821017627246Segniliparus rotundus DSM 44985 chromosome, complete genomehypothetical protein1e-1168.9
NC_013757:1499643:150079215007921501025234Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, MerR family6e-1166.2
NC_013757:900500:918016918016918369354Geodermatophilus obscurus DSM 43160, complete genomeputative transcriptional regulator, MerR family7e-1062.8
NC_016943:4194002:421257042125704212824255Blastococcus saxobsidens DD2, complete genomemerR family transcriptional regulator8e-0959.3
NC_008699:590000:591718591718591897180Nocardioides sp. JS614, complete genomeDNA binding domain, excisionase family5e-0856.6
NC_008595:2215244:222177022217702221979210Mycobacterium avium 104, complete genomehypothetical protein2e-0754.3
NC_008699:1816392:183312418331241833366243Nocardioides sp. JS614, complete genomehypothetical protein9e-0752.4