Pre_GI: BLASTP Hits

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Query: NC_008146:4019711:4034635 Mycobacterium sp. MCS, complete genome

Start: 4034635, End: 4035624, Length: 990

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:4053070:406911740691174070106990Mycobacterium sp. KMS, complete genomeconserved hypothetical protein0644
NC_008596:4104476:412023941202394121222984Mycobacterium smegmatis str. MC2 155, complete genomecyclase1e-53210
NC_018581:759932:793002793002793943942Gordonia sp. KTR9 chromosome, complete genomecyclase3e-49196
NC_010501:1868888:188021218802121881174963Pseudomonas putida W619, complete genomehypothetical protein4e-44178
NC_007181:1856455:187293018729301873880951Sulfolobus acidocaldarius DSM 639, complete genomehypothetical protein8e-44177
NC_016906:2871272:290086429008642901784921Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative cyclase7e-31134
NC_014837:809911:8229268229268239691044Pantoea sp. At-9b chromosome, complete genomehypothetical protein3e-27122
NC_013222:1659619:167025816702581671226969Robiginitalea biformata HTCC2501, complete genomehypothetical polyketide cyclase1e-26120
NC_010581:2943913:2943913294391329449591047Beijerinckia indica subsp. indica ATCC 9039, complete genomemetal-dependent hydrolase4e-23108
NC_015957:3067919:308772330877233088697975Streptomyces violaceusniger Tu 4113 chromosome, complete genomecyclase1e-21103
NC_015723:961909:9830259830259840801056Cupriavidus necator N-1 chromosome 2, complete sequencehypothetical protein4e-21102
NC_015434:3581001:358014235801423581008867Verrucosispora maris AB-18-032 chromosome, complete genomecyclase family protein1e-1687
NC_018531:2085939:210719221071922108178987Arthrobacter sp. Rue61a chromosome, complete genomehypothetical protein5e-1685.5
NC_016111:6175975:618966961896696190508840Streptomyces cattleya NRRL 8057, complete genomehypothetical protein5e-1582
NC_008596:4043213:406309340630934063911819Mycobacterium smegmatis str. MC2 155, complete genomecyclase1e-1480.5
NC_013757:1343396:1351819135181913530151197Geodermatophilus obscurus DSM 43160, complete genomeputative cyclase1e-1067.8
NC_013757:1888850:188885018888501889323474Geodermatophilus obscurus DSM 43160, complete genome2e-0860.5