Pre_GI: BLASTP Hits

Some Help

Query: NC_008146:4019711:4023619 Mycobacterium sp. MCS, complete genome

Start: 4023619, End: 4024326, Length: 708

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:4053070:405810140581014058808708Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family3e-109394
NC_015957:4525580:453035845303584530966609Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR2e-2099.8
NC_008595:2661019:266494926649492665632684Mycobacterium avium 104, complete genometranscriptional regulator, TetR family protein7e-1270.9
NC_010397:815549:830731830731831375645Mycobacterium abscessus chromosome Chromosome, complete sequencePutative transcriptional regulator, TetR family5e-1167.8
NC_014666:1805806:180967518096751810361687Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR8e-1167.4
NC_015594:160848:162812162812163504693Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeregulatory protein TetR3e-1065.9
NC_013856:692000:702422702422703090669Azospirillum sp. B510 plasmid pAB510b, complete sequencetranscriptional regulator6e-0961.2
NC_015953:6212366:621706162170616217693633Streptomyces sp. SirexAA-E chromosome, complete genomeTetR family transcriptional regulator3e-0858.9
NC_007794:561623:562789562789563454666Novosphingobium aromaticivorans DSM 12444, complete genometranscriptional regulator, TetR family2e-0755.8
NC_014210:2372813:240405724040572404686630Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, TetR family8e-0753.9