Pre_GI: BLASTP Hits

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Query: NC_008146:3401743:3413807 Mycobacterium sp. MCS, complete genome

Start: 3413807, End: 3414244, Length: 438

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016947:2380500:238738323873832387820438Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein1e-80297
NC_009077:3376351:338760133876013388038438Mycobacterium sp. JLS, complete genomeuncharacterized domain 11e-80297
NC_008705:3430839:344208934420893442526438Mycobacterium sp. KMS, complete genomeuncharacterized domain 11e-80297
NC_017904:2353800:236996623699662370403438Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein5e-78288
NC_009338:4913510:492280149228014923235435Mycobacterium gilvum PYR-GCK chromosome, complete genomethioesterase superfamily protein4e-60229
NC_009077:4810379:481523848152384815690453Mycobacterium sp. JLS, complete genomeuncharacterized domain 14e-55213
NC_009615:1734752:175210417521041752517414Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein3e-1167
NC_014151:449732:456052456052456519468Cellulomonas flavigena DSM 20109 chromosome, complete genomethioesterase superfamily protein8e-1062.4
NC_008686:1383891:141241114124111412872462Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein3e-0960.5
NC_021177:5419620:542077954207795421240462Streptomyces fulvissimus DSM 40593, complete genomeThioesterase family protein1e-0858.5
NC_009767:2866668:287209928720992872527429Roseiflexus castenholzii DSM 13941, complete genomethioesterase superfamily protein8e-0855.8
NC_017986:4790482:482060948206094821142534Pseudomonas putida ND6 chromosome, complete genomethioesterase superfamily protein4e-0650.4
NC_013501:1691532:171136217113621711799438Rhodothermus marinus DSM 4252, complete genomethioesterase superfamily protein4e-0650.1
NC_014761:1196669:121862912186291219054426Oceanithermus profundus DSM 14977 chromosome, complete genomethioesterase superfamily protein4e-0650.1
NC_013854:513196:513196513196513639444Azospirillum sp. B510, complete genomehypothetical protein6e-0649.7
NC_013947:5546315:555712655571265557599474Stackebrandtia nassauensis DSM 44728 chromosome, complete genomethioesterase superfamily protein6e-0649.7
NC_013406:303218:306885306885307334450Paenibacillus sp. Y412MC10 chromosome, complete genomethioesterase superfamily protein7e-0649.3
NC_006322:3198829:320463532046353205024390Bacillus licheniformis ATCC 14580, complete genomeYuxO8e-0649.3