Pre_GI: BLASTP Hits

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Query: NC_008146:3401743:3401743 Mycobacterium sp. MCS, complete genome

Start: 3401743, End: 3402555, Length: 813

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016947:2380500:239907223990722399884813Mycobacterium intracellulare MOTT-02 chromosome, complete genomewyosine base formation1e-141502
NC_009338:4869700:489136948913694892181813Mycobacterium gilvum PYR-GCK chromosome, complete genomewyosine base formation5e-107387
NC_016109:2065326:206867320686732069488816Kitasatospora setae KM-6054, complete genomehypothetical protein9e-59226
NC_013510:747042:770784770784771569786Thermomonospora curvata DSM 43183, complete genomeWyosine base formation domain protein1e-54213
NC_009921:3666898:370410037041003704909810Frankia sp. EAN1pec, complete genomeconserved hypothetical protein3e-51201
NC_015957:5310000:532233953223395323112774Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein7e-47187
NC_008278:3601959:360454736045473605335789Frankia alni ACN14a, complete genomehypothetical protein2e-44179
NC_009380:3043140:304793130479313048851921Salinispora tropica CNB-440 chromosome, complete genomewyosine base formation3e-41168
NC_008358:1861505:188333418833341884134801Hyphomonas neptunium ATCC 15444, complete genomehypothetical protein9e-36150