Pre_GI: BLASTP Hits

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Query: NC_008146:2744612:2767325 Mycobacterium sp. MCS, complete genome

Start: 2767325, End: 2767771, Length: 447

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:2763131:278521327852132785659447Mycobacterium sp. KMS, complete genomeuncharacterized domain 15e-80295
NC_011894:3475775:348161234816123482076465Methylobacterium nodulans ORS 2060, complete genomephenylacetic acid degradation protein PaaD2e-1994.7
NC_014722:1084616:108596410859641086434471Burkholderia rhizoxinica HKI 454, complete genomephenylacetic acid degradation protein paaI2e-1994.4
NC_018691:896464:900076900076900546471Alcanivorax dieselolei B5 chromosome, complete genomePhenylacetic acid degradation protein PaaI, putative2e-1891.3
NC_015733:2963548:298416629841662984606441Pseudomonas putida S16 chromosome, complete genomephenylacetic acid degradation protein PaaD5e-1786.3
NC_013892:114884:122340122340122807468Xenorhabdus bovienii SS-2004 chromosome, complete genomephenylacetic acid degradation protein with thioesterase/thiol ester dehydrase-isomerase domain5e-1683.2
NC_014228:4408500:441794744179474418483537Xenorhabdus nematophila ATCC 19061, complete genomeputative phenylacetic acid degradation protein with thioesterase/thiol ester dehydrase-isomerase domain (modular protein)9e-1475.9
NC_015638:1824794:183495518349551835368414Lacinutrix sp. 5H-3-7-4 chromosome, complete genomephenylacetic acid degradation-like protein5e-1373.2
NC_020302:3014483:304140630414063041849444Corynebacterium halotolerans YIM 70093 = DSM 44683, completephenylacetic acid degradation protein3e-1270.5
NC_003413:1107965:112162811216281122020393Pyrococcus furiosus DSM 3638, complete genomehypothetical protein2e-1064.3
NC_017272:921193:920832920832921236405Thermus thermophilus SG0.5JP17-16 chromosome, complete genomephenylacetic acid degradation protein PaaD5e-1063.5
NC_016885:1153277:116182311618231162215393Pyrobaculum oguniense TE7 chromosome, complete genomehypothetical protein7e-1062.8
NC_014973:2894248:290416129041612904595435Geobacter sp. M18 chromosome, complete genomethioesterase superfamily protein8e-1062.8
NC_020389:1936000:194942619494261949878453Methanosarcina mazei Tuc01, complete genomePhenylacetic acid degradation protein paaI1e-0858.9
NC_015565:128350:152900152900153307408Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completephenylacetic acid degradation-like protein2e-0858.2
NC_016147:1788219:179887117988711799374504Pseudoxanthomonas spadix BD-a59 chromosome, complete genomephenylacetic acid degradation protein PaaD2e-0857.8
NC_018012:3102215:310451131045113104930420Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein3e-0857.4
NC_009454:1042592:105463910546391055076438Pelotomaculum thermopropionicum SI, complete genomehypothetical protein6e-0856.6
NC_010814:2394250:239380323938032394264462Geobacter lovleyi SZ, complete genomethioesterase superfamily protein5e-0753.1
NC_012891:1277966:127882612788261279218393Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,thioesterase superfamily protein4e-0650.4