Pre_GI: BLASTP Hits

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Query: NC_008146:2744612:2758495 Mycobacterium sp. MCS, complete genome

Start: 2758495, End: 2758860, Length: 366

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:2763131:277638327763832776748366Mycobacterium sp. KMS, complete genomeconserved hypothetical protein4e-67252
NC_014814:2588628:261874126187412619103363Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator1e-59228
NC_018532:166468:181421181421181774354Arthrobacter sp. Rue61a plasmid p232, complete sequencehypothetical protein6e-44176
NC_009142:2480608:251273525127352513061327Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein9e-1889
NC_016943:1356419:136125213612521361596345Blastococcus saxobsidens DD2, complete genomeputative XRE family transcriptional regulator1e-1788.6
NC_016943:4194002:425921642592164259560345Blastococcus saxobsidens DD2, complete genomehypothetical protein1e-1788.6
NC_009921:3098271:312123831212383121597360Frankia sp. EAN1pec, complete genomeputative transcriptional regulator, XRE family2e-1684
NC_018532:166468:184478184478184819342Arthrobacter sp. Rue61a plasmid p232, complete sequencehypothetical protein1e-1272
NC_016604:3097392:310196931019693102319351Mycobacterium rhodesiae NBB3 chromosome, complete genomehypothetical protein3e-1270.9
NC_016604:2944555:296748229674822967832351Mycobacterium rhodesiae NBB3 chromosome, complete genomehypothetical protein3e-1270.9
NC_006087:2470708:249004324900432490387345Leifsonia xyli subsp. xyli str. CTCB07, complete genomehypothetical protein4e-1270.1
NC_014815:4385759:441656544165654416882318Micromonospora sp. L5 chromosome, complete genomehypothetical protein1e-1168.2
NC_016604:2944555:296442229644222964772351Mycobacterium rhodesiae NBB3 chromosome, complete genomehypothetical protein3e-1167
NC_009338:603663:609217609217609531315Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein3e-1167
NC_008726:6335961:633919263391926339506315Mycobacterium vanbaalenii PYR-1, complete genomeconserved hypothetical protein3e-1167
NC_014814:4235477:426680742668074267121315Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator1e-1065.1
NC_015145:92397:113869113869114213345Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomehypothetical protein7e-1062.8
NC_015957:4963500:496901649690164969330315Streptomyces violaceusniger Tu 4113 chromosome, complete genometranscriptional regulator1e-0962
NC_015312:6398931:640413464041346404451318Pseudonocardia dioxanivorans CB1190 chromosome, complete genometranscriptional regulator1e-0961.6
NC_015312:1265797:127627812762781276556279Pseudonocardia dioxanivorans CB1190 chromosome, complete genometranscriptional regulator1e-0961.6
NC_014830:850542:853993853993854316324Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein5e-0753.1
NC_014830:3870000:387679438767943877117324Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein5e-0753.1
NC_019897:73957:125091125091125336246Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator1e-0652