Pre_GI: BLASTP Hits

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Query: NC_008146:1016446:1017714 Mycobacterium sp. MCS, complete genome

Start: 1017714, End: 1018157, Length: 444

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:1022252:102352010235201023963444Mycobacterium sp. KMS, complete genometranscriptional regulator, Fis family2e-60230
NC_009077:1027357:103213710321371032580444Mycobacterium sp. JLS, complete genometranscriptional regulator, Fis family8e-59225
NC_019673:8763773:879093787909378791350414Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-0755.1
NC_009664:1569335:160559116055911605824234Kineococcus radiotolerans SRS30216, complete genomepreprotein translocase, SecE subunit2e-0754.7
NC_010572:3363830:337975533797553380042288Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative preprotein translocase SecE2e-0651.2
NC_021177:4912982:491820549182054918492288Streptomyces fulvissimus DSM 40593, complete genomePreprotein translocase subunit SecE3e-0650.8
NC_016109:3591401:360819736081973608565369Kitasatospora setae KM-6054, complete genomeputative preprotein translocase SecE subunit6e-0649.7