Pre_GI: BLASTP Hits

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Query: NC_008044:857759:870157 Silicibacter sp. TM1040, complete genome

Start: 870157, End: 870582, Length: 426

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008044:136844:150726150726151112387Silicibacter sp. TM1040, complete genomeresponse regulator receiver protein1e-1891.7
NC_014934:4164603:416750241675024167903402Cellulophaga algicola DSM 14237 chromosome, complete genomeresponse regulator receiver protein3e-1684
NC_015638:3113253:311681731168173117257441Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeresponse regulator receiver4e-1270.1
NC_008043:499399:511757511757512116360Silicibacter sp. TM1040 mega plasmid, complete sequenceresponse regulator receiver protein3e-1167.4
NC_013222:817686:854156854156854554399Robiginitalea biformata HTCC2501, complete genomeresponse regulator4e-1166.6
NC_001264:28266:534665346653915450Deinococcus radiodurans R1 chromosome 2, complete sequenceresponse regulator2e-1064.7
NC_015177:2972701:298715929871592987551393Pedobacter saltans DSM 12145 chromosome, complete genomeresponse regulator receiver2e-1064.3
NC_013730:2403930:240692224069222407329408Spirosoma linguale DSM 74, complete genomeresponse regulator receiver protein4e-1063.5
NC_010505:5525461:554401855440185544443426Methylobacterium radiotolerans JCM 2831, complete genomeresponse regulator receiver protein3e-0960.5
NC_007645:4356865:437293843729384373390453Hahella chejuensis KCTC 2396, complete genomeFOG: CheY-like receiver2e-0858.2
NC_013222:817686:853712853712854128417Robiginitalea biformata HTCC2501, complete genomeresponse regulator4e-0857
NC_016112:57641:627546275463158405Methylomicrobium alcaliphilum chromosome, complete genomeresponse regulator receiver protein4e-0856.6
NC_010337:565730:571006571006571980975Heliobacterium modesticaldum Ice1, complete genometwo component diguanylate cyclase1e-0755.1
NC_018868:1352000:1379215137921513822293015Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomemulti-sensor hybrid histidine kinase2e-0754.7
NC_014973:2894248:289748028974802897875396Geobacter sp. M18 chromosome, complete genomeresponse regulator receiver protein2e-0754.7
NC_014972:2659388:2685767268576726892103444Desulfobulbus propionicus DSM 2032 chromosome, complete genomeCheA signal transduction histidine kinase3e-0753.9
NC_002488:1812696:1855863185586318611305268Xylella fastidiosa 9a5c, complete genomechemotaxis-related protein kinase3e-0753.9
NC_004113:1026886:1048486104848610511012616Thermosynechococcus elongatus BP-1, complete genometwo-component hybrid sensor & regulator4e-0753.5
NC_014817:1063173:107599910759991076418420Asticcacaulis excentricus CB 48 chromosome 2, complete sequenceresponse regulator receiver protein5e-0753.1
NC_014315:114151:1179431179431232315289Nitrosococcus watsoni C-113 chromosome, complete genomeCheA signal transduction histidine kinase2e-0651.2
NC_012559:978419:9795639795639831803618Laribacter hongkongensis HLHK9, complete genomeSensor protein3e-0650.8
NC_009092:1127000:1127012112701211305273516Shewanella loihica PV-4, complete genomemulti-sensor hybrid histidine kinase3e-0650.4
NC_014815:3005970:302528430252843025736453Micromonospora sp. L5 chromosome, complete genomeresponse regulator receiver protein3e-0650.4
NC_010511:3106418:311262131126213113007387Methylobacterium sp. 4-46 chromosome, complete genomeresponse regulator receiver protein4e-0650.1
NC_013922:2759914:277599927759992776463465Natrialba magadii ATCC 43099 chromosome, complete genomeresponse regulator receiver protein6e-0649.7
NC_015966:2337833:2370093237009323715231431Rhodothermus marinus SG0.5JP17-172 chromosome, complete genometwo component, sigma54 specific, Fis family transcriptional regulator6e-0649.7
NC_019697:4108944:4112044411204441138131770Chamaesiphon minutus PCC 6605, complete genomebacteriophytochrome (light-regulated signal transduction histidine kinase)9e-0648.9