Pre_GI: BLASTP Hits

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Query: NC_008044:3024125:3030831 Silicibacter sp. TM1040, complete genome

Start: 3030831, End: 3031286, Length: 456

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009952:3596399:363375736337573634194438Dinoroseobacter shibae DFL 12, complete genomeUPF0093 membrane protein9e-44175
NC_008789:942309:959849959849960274426Halorhodospira halophila SL1, complete genomeconserved hypothetical protein 7011e-1582
NC_010793:541040:543104543104543538435Orientia tsutsugamushi str. Ikeda, complete genomehypothetical protein2e-1478.2
NC_014935:711765:734412734412734843432Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehypothetical protein3e-1374.3
NC_017277:240863:256647256647257279633Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-1168.6
NC_017052:240851:256635256635257267633Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-1168.6
NC_017039:240863:256647256647257279633Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-1168.6
NC_000911:240863:256647256647257279633Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-1168.6
NC_014394:3114648:311789931178993118312414Gallionella capsiferriformans ES-2 chromosome, complete genomeuncharacterized protein family UPF00937e-1166.2
NC_015581:771482:798416798416798844429Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomehypothetical protein6e-1063.2
NC_014323:625155:649112649112649537426Herbaspirillum seropedicae SmR1 chromosome, complete genomeinner membrane protein6e-1062.8
NC_013889:413909:416187416187416705519Thioalkalivibrio sp. K90mix chromosome, complete genomehypothetical protein7e-1062.8
NC_007947:485828:486639486639487052414Methylobacillus flagellatus KT, complete genomeconserved hypothetical protein 7013e-0960.8
NC_012968:507988:526672526672527097426Methylotenera mobilis JLW8, complete genomehypothetical protein3e-0857.4
NC_014752:324832:339834339834340262429Neisseria lactamica ST-640, complete genomehypothetical protein4e-0857
NC_008767:1888950:190242819024281902865438Neisseria meningitidis FAM18, complete genomeconserved hypothetical inner membrane protein6e-0856.2