Pre_GI: BLASTP Hits

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Query: NC_008044:3024125:3024727 Silicibacter sp. TM1040, complete genome

Start: 3024727, End: 3025785, Length: 1059

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007802:179780:1828511828511838671017Jannaschia sp. CCS1, complete genomeMltA8e-123440
NC_009952:3596399:3627798362779836288261029Dinoroseobacter shibae DFL 12, complete genomemembrane-bound lytic murein transglycosylase A1e-109396
NC_007614:2764848:2794097279409727952901194Nitrosospira multiformis ATCC 25196 chromosome 1, completeMltA1e-62240
NC_016616:1091606:1093534109353410947721239Dechlorosoma suillum PS chromosome, complete genomemembrane-bound lytic murein transglycosylase7e-61234
NC_012559:2663747:2711678271167827128441167Laribacter hongkongensis HLHK9, complete genomeMembrane-bound lytic murein transglycosylase6e-59228
NC_009850:2169459:2192344219234421934321089Arcobacter butzleri RM4018, complete genomepeptidoglycan N-acetylmuramoylhydrolase4e-50198
NC_009727:1177390:1189755118975511909571203Coxiella burnetii Dugway 7E9-12, complete genomemembrane-bound lytic murein transglycosylase family protein1e-49197
NC_020209:4312892:4314921431492143161171197Pseudomonas poae RE*1-1-14, complete genometransglycosylase2e-43176
NC_014844:2158318:2159230215923021604981269Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeMltA domain-containing protein8e-41167
NC_019815:679592:6795926795926808181227Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneihypothetical protein1e-39164
NC_009925:3344894:3359651335965133608291179Acaryochloris marina MBIC11017, complete genomemembrane-bound lytic transglycosylase A, putative2e-35149
NC_020304:256000:2765392765392777261188Desulfocapsa sulfexigens DSM 10523, complete genomemembrane-bound lytic murein transglycosylase4e-34145
NC_016513:54802:7442474424755421119Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completemurein transglycosyllase A8e-31134
NC_003272:637970:6581236581236593161194Nostoc sp. PCC 7120, complete genomehypothetical protein8e-29127
NC_007613:2699500:2702547270254727036441098Shigella boydii Sb227, complete genomemembrane-bound lytic murein transglycosylase A5e-28125
NC_010498:3023442:3029219302921930302861068Escherichia coli SMS-3-5, complete genomemembrane-bound lytic murein transglycosylase A5e-28125
NC_011745:3197584:3203360320336032044571098Escherichia coli ED1a chromosome, complete genomemurein transglycosylase A5e-28125
NC_013361:3823347:3829123382912338302201098Escherichia coli O26:H11 str. 11368 chromosome, complete genomemurein transglycosylase A4e-28125
NC_011283:942594:9638899638899649861098Klebsiella pneumoniae 342 chromosome, complete genomemurein transglycosylase A2e-27123
NC_016632:398018:3980183980183991781161Serratia symbiotica str. 'Cinara cedri' chromosome, completemembrane-bound lytic murein transglycosylase A2e-25116
NC_004061:498483:5055935055935066931101Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomemembrane-bound lytic murein transglycosylase3e-25116
NC_004459:1794540:1799230179923018003331104Vibrio vulnificus CMCP6 chromosome I, complete sequenceMembrane-bound lytic murein transglycosylase2e-23110
NC_017259:480656:4832184832184843001083Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,murein transglycosylase A2e-22107