Pre_GI: BLASTP Hits

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Query: NC_008044:1736000:1748417 Silicibacter sp. TM1040, complete genome

Start: 1748417, End: 1749649, Length: 1233

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010505:5496170:5513297551329755145231227Methylobacterium radiotolerans JCM 2831, complete genomephage integrase1e-23111
NC_010511:4696868:4732853473285347340821230Methylobacterium sp. 4-46 chromosome, complete genomephage integrase2e-21103
NC_011985:2902000:2920411292041129215741164Agrobacterium radiobacter K84 chromosome 1, complete genomephage integrase protein3e-1273.6