Pre_GI: BLASTP Hits

Some Help

Query: NC_008043:167108:186865 Silicibacter sp. TM1040 mega plasmid, complete sequence

Start: 186865, End: 187434, Length: 570

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016026:2170500:217067721706772171468792Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehypothetical protein1e-2099.8
NC_012982:1899973:190377719037771904412636Hirschia baltica ATCC 49814, complete genomehypothetical protein6e-1890.5