Pre_GI: BLASTP Hits

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Query: NC_007953:572926:601264 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 601264, End: 601677, Length: 414

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015576:4070195:407976940797694080182414Mycobacterium sp. JDM601 chromosome, complete genomehypothetical protein6e-30129
NC_016948:1796989:1814359181435918159781620Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein7e-29125
NC_015656:3200500:3214122321412232156931572Frankia symbiont of Datisca glomerata chromosome, complete genomehypothetical protein2e-25114
NC_012522:7763426:777773277777327778145414Rhodococcus opacus B4, complete genomehypothetical protein3e-25113
NC_018581:3202281:3213616321361632152891674Gordonia sp. KTR9 chromosome, complete genomeAcetyl-CoA acetyltransferase5e-25112
NC_008595:1951887:195780119578011958157357Mycobacterium avium 104, complete genomehypothetical protein3e-23107
NC_008595:1911491:191382219138221914271450Mycobacterium avium 104, complete genomeacyl dehydratase2e-1787.4
NC_017904:1896322:191222019122201912633414Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein1e-1685.1
NC_015312:1893945:190847219084721908936465Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein2e-1684.7
NC_007953:504939:524735524735525166432Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein3e-1684
NC_008595:2661019:267867826786782679112435Mycobacterium avium 104, complete genomehypothetical protein4e-1683.2
NC_003155:5163382:516607551660755167025951Streptomyces avermitilis MA-4680, complete genomehypothetical protein2e-1580.9
NC_014640:4193193:420049642004964200894399Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein2e-1478.2
NC_008595:2661019:266952926695292669984456Mycobacterium avium 104, complete genomeprotein of unknown function DUF353e-1477
NC_015684:3157941:316332031633203163718399Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein1e-1375.5
NC_009921:5508000:552653455265345526995462Frankia sp. EAN1pec, complete genomeprotein of unknown function DUF351e-1375.1
NC_008726:925895:929656929656930078423Mycobacterium vanbaalenii PYR-1, complete genomeprotein of unknown function DUF352e-1374.3
NC_015379:2505233:252861225286122529025414Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein4e-1373.6
NC_021177:4124839:4142776414277641438161041Streptomyces fulvissimus DSM 40593, complete genomeDUF35 multi-domain protein5e-1373.2
NC_002927:3716894:376731237673123767734423Bordetella bronchiseptica RB50, complete genomehypothetical protein1e-1272
NC_017506:1:408094080940964156Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein2e-1271.6
NC_014814:169374:190911190911191369459Mycobacterium sp. Spyr1 chromosome, complete genomenucleic-acid-binding protein containing a Zn-ribbon1e-1271.6
NC_008595:1951887:195618819561881956607420Mycobacterium avium 104, complete genomeprotein of unknown function DUF351e-1271.6
NC_016906:2871272:289160928916092892019411Gordonia polyisoprenivorans VH2 chromosome, complete genomehypothetical protein1e-1168.6
NC_016943:3270308:330152733015273301916390Blastococcus saxobsidens DD2, complete genomehypothetical protein2e-1167.8
NC_009077:1725683:174788617478861748344459Mycobacterium sp. JLS, complete genomeprotein of unknown function DUF352e-1167.8
NC_008705:1790222:181242518124251812883459Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF352e-1167.8
NC_008726:549102:572743572743573201459Mycobacterium vanbaalenii PYR-1, complete genomeprotein of unknown function DUF352e-1167.8
NC_009338:555587:581871581871582329459Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein2e-1167.8
NC_009338:630130:655555655555656013459Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein2e-1167.8
NC_014098:1258559:126649412664941266907414Bacillus tusciae DSM 2912 chromosome, complete genomeprotein of unknown function DUF355e-1166.6
NC_008278:2863355:288216928821692882570402Frankia alni ACN14a, complete genomehypothetical protein1e-1065.1
NC_008278:2882567:288216928821692882570402Frankia alni ACN14a, complete genomehypothetical protein1e-1065.1
NC_018531:2085939:208847820884782088918441Arthrobacter sp. Rue61a chromosome, complete genomenucleic-acid-binding protein containinga Zn-ribbon5e-1063.2
NC_016604:3184855:319610031961003196558459Mycobacterium rhodesiae NBB3 chromosome, complete genomeputative nucleic-acid-binding protein containing a Zn-ribbon6e-1062.8
NC_016947:2380500:239491823949182395355438Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein1e-0962
NC_008146:3401743:340627234062723406709438Mycobacterium sp. MCS, complete genomeprotein of unknown function DUF351e-0962
NC_009077:3376351:338006633800663380503438Mycobacterium sp. JLS, complete genomeprotein of unknown function DUF351e-0962
NC_008705:3430839:343455434345543434991438Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF351e-0962
NC_007974:2097334:215465421546542155127474Ralstonia metallidurans CH34 chromosome 2, complete sequenceprotein of unknown function DUF351e-0961.6
NC_016147:2820232:283484428348442835212369Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein2e-0961.2
NC_018581:4992952:499992049999205000363444Gordonia sp. KTR9 chromosome, complete genomeputative nucleic-acid-binding protein5e-0959.7
NC_015562:1460124:147704114770411477436396Methanotorris igneus Kol 5 chromosome, complete genomehypothetical protein9e-0958.9
NC_016947:1455744:146153114615311461761231Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein2e-0857.8
NC_008595:2687245:270478127047812705011231Mycobacterium avium 104, complete genomehypothetical protein2e-0857.8
NC_009654:4716417:473844847384484738885438Marinomonas sp. MWYL1, complete genomehypothetical protein2e-0857.8
NC_008146:4936262:495483149548314955787957Mycobacterium sp. MCS, complete genomeprotein of unknown function DUF353e-0857
NC_008705:4975402:499248949924894993445957Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF353e-0857
NC_017904:5543490:555315055531505553575426Mycobacterium sp. MOTT36Y chromosome, complete genomeacyl dehydratase3e-0857
NC_009077:5286275:530610253061025307055954Mycobacterium sp. JLS, complete genomeprotein of unknown function DUF355e-0856.6
NC_012589:260703:275932275932276288357Sulfolobus islandicus L.S.2.15, complete genomeprotein of unknown function DUF355e-0856.2
NC_016948:2931285:295757129575712957894324Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein6e-0856.2
NC_012726:255774:273583273583273939357Sulfolobus islandicus M.16.4 chromosome, complete genomehypothetical protein1e-0755.5
NC_012632:243982:263003263003263359357Sulfolobus islandicus M.16.27 chromosome, complete genomehypothetical protein1e-0755.1
NC_003901:1027183:102782710278271028225399Methanosarcina mazei Go1, complete genomehypothetical protein2e-0754.3
NC_000909:1517461:152831815283181528743426Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein3e-0753.9
NC_014640:4951076:497862949786294979018390Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein4e-0753.5
NC_015847:1261276:128771612877161288108393Methanococcus maripaludis XI chromosome, complete genomehypothetical protein6e-0752.8
NC_008278:175500:187150187150187554405Frankia alni ACN14a, complete genomehypothetical protein1e-0652
NC_008595:2687245:270237827023782702701324Mycobacterium avium 104, complete genomehypothetical protein1e-0651.6
NC_016947:1455744:145912814591281459451324Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein2e-0651.6
NC_008268:442657:460161460161460643483Rhodococcus sp. RHA1, complete genomehypothetical protein2e-0651.2