Pre_GI: BLASTP Hits

Some Help

Query: NC_007953:572926:598766 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 598766, End: 600028, Length: 1263

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017506:1:3251032510337841275Marinobacter adhaerens HP15 chromosome, complete genomemajor facilitator superfamily protein2e-83310
NC_012982:1597697:1602582160258216038231242Hirschia baltica ATCC 49814, complete genomemajor facilitator superfamily MFS_12e-32140
NC_008542:197500:1986091986091998711263Burkholderia cenocepacia HI2424 chromosome 1, complete sequencemajor facilitator superfamily MFS_12e-29130
NC_018691:3082000:3086521308652130877681248Alcanivorax dieselolei B5 chromosome, complete genomeMajor facilitator family transporter5e-27122
NC_009511:4582188:4587859458785945891391281Sphingomonas wittichii RW1 chromosome, complete genomemajor facilitator transporter3e-23110
NC_007974:138176:1710941710941723411248Ralstonia metallidurans CH34 chromosome 2, complete sequencemajor facilitator superfamily MFS_13e-21103
NC_012982:2730000:2743362274336227446451284Hirschia baltica ATCC 49814, complete genomemajor facilitator superfamily MFS_12e-1480.9
NC_014210:1625954:1641000164100016423131314Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,major facilitator superfamily MFS_12e-1480.5
NC_013929:1670402:1678649167864916799051257Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein9e-0755.1
NC_013929:1611940:1633677163367716353291653Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-0654.3