Pre_GI: BLASTP Hits

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Query: NC_007953:572926:596866 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 596866, End: 597480, Length: 615

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010170:4409683:442852144285214429150630Bordetella petrii, complete genomePutative HTH-type transcriptional regulator, AcrR-family1e-1169.7
NC_015566:1127595:116103711610371161717681Serratia sp. AS12 chromosome, complete genomeTetR family transcriptional regulator6e-0754.3
NC_015567:1127780:116122211612221161902681Serratia sp. AS9 chromosome, complete genomeTetR family transcriptional regulator6e-0754.3
NC_010067:4149298:416320141632014163884684Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-0651.2
NC_016002:2453919:247109424710942471732639Pseudogulbenkiania sp. NH8B, complete genomeTetR family transcriptional regulator5e-0651.2