Pre_GI: BLASTP Hits

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Query: NC_007953:572926:595494 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 595494, End: 596417, Length: 924

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010625:1415500:143259414325941433469876Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceamidohydrolase 22e-27122
NC_016935:4435759:444102744410274441866840Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-25116
NC_008786:2573558:258160325816032582478876Verminephrobacter eiseniae EF01-2, complete genomeamidohydrolase 22e-22106
NC_015145:3657103:366282836628283663712885Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeTIM-barrel fold metal-dependent hydrolase, COG36181e-1894
NC_003912:472000:492528492528493298771Campylobacter jejuni RM1221, complete genomehypothetical protein2e-1273.2
NC_017279:437665:459022459022459792771Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeputative amidohydrolase2e-1273.2
NC_017281:433995:454497454497455267771Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomehypothetical protein2e-1273.2
NC_013442:6586:1288012880139171038Gordonia bronchialis DSM 43247 plasmid pGBRO01, complete sequenceamidohydrolase 21e-0860.5
NC_015635:811500:830865830865831728864Microlunatus phosphovorus NM-1, complete genomeputative hydrolase1e-0757.4
NC_013956:1762171:1776177177617717772471071Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein1e-0654.3
NC_015381:4182194:4199225419922542003611137Burkholderia gladioli BSR3 chromosome 1, complete sequenceamidohydrolase 22e-0653.5