Pre_GI: BLASTP Hits

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Query: NC_007953:572926:572926 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 572926, End: 574215, Length: 1290

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010508:1865602:1880259188025918815451287Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencenatural resistance-associated macrophage protein7e-114410
NC_009485:7626677:7643071764307176443781308Bradyrhizobium sp. BTAi1 chromosome, complete genomemanganese transport protein2e-112406
NC_017249:3181976:3200135320013532014991365Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein8e-109394
NC_011894:6259649:6269804626980462711471344Methylobacterium nodulans ORS 2060, complete genomenatural resistance-associated macrophage protein2e-92340
NC_011983:508287:5082875082875096031317Agrobacterium radiobacter K84 chromosome 2, complete genomemanganese transport protein5e-86318
NC_009441:3597020:3607615360761536088771263Flavobacterium johnsoniae UW101 chromosome, complete genomenatural resistance-associated macrophage protein2e-62239
NC_007951:570500:604115604115604717603Burkholderia xenovorans LB400 chromosome 1, complete sequence2e-54213
NC_007951:570500:6034116034116044151005Burkholderia xenovorans LB400 chromosome 1, complete sequence8e-50198
NC_020291:1871846:1890352189035218915931242Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeMn2+ and Fe2+ transporters of the NRAMP family2e-29130
NC_014328:1739578:1739578173957817408311254Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative divalent cation transporter4e-27122
NC_011146:3720658:3729560372956037307861227Geobacter bemidjiensis Bem, complete genomenatural resistance-associated macrophage protein2e-25117
NC_009485:1604942:1637667163766716393011635Bradyrhizobium sp. BTAi1 chromosome, complete genomemanganese transport protein8e-1995.1
NC_009712:1446472:1469874146987414711421269Candidatus Methanoregula boonei 6A8, complete genomenatural resistance-associated macrophage protein2e-1894
NC_013204:74855:1010231010231023391317Eggerthella lenta DSM 2243, complete genomenatural resistance-associated macrophage protein2e-1894
NC_010682:1652636:1678053167805316796961644Ralstonia pickettii 12J chromosome 1, complete sequencenatural resistance-associated macrophage protein1e-1791.3
NC_014934:4164603:4182580418258041837701191Cellulophaga algicola DSM 14237 chromosome, complete genomenatural resistance-associated macrophage protein4e-1789.4
NC_015944:10500:3454134541357491209Haloarcula hispanica ATCC 33960 plasmid pHH400, complete sequenceputative Mn transporter1e-1687.8
NC_010682:3313944:3315564331556433172071644Ralstonia pickettii 12J chromosome 1, complete sequencenatural resistance-associated macrophage protein2e-1687.4
NC_002932:937157:9536779536779549361260Chlorobium tepidum TLS, complete genomenatural resistance-associated macrophage protein family protein5e-1685.9
NC_017904:4742775:4754341475434147560081668Mycobacterium sp. MOTT36Y chromosome, complete genomeMn2+/Fe2+ transporter1e-1378.2
NC_017904:3113000:3117725311772531193231599Mycobacterium sp. MOTT36Y chromosome, complete genomeMn2+/Fe2+ transporter3e-1376.6
NC_017904:4742775:4766487476648747681631677Mycobacterium sp. MOTT36Y chromosome, complete genomeMn2+/Fe2+ transporter4e-1376.3
NC_009485:7827782:7831083783108378327111629Bradyrhizobium sp. BTAi1 chromosome, complete genomemanganese transport transmembrane protein6e-1375.9
NC_015942:63440:6556965569668341266Acidithiobacillus ferrivorans SS3 chromosome, complete genomeNRAMP family metal ion transporter2e-1273.9
NC_017167:2203159:2210845221084522121731329Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1natural resistance-associated macrophage protein5e-1272.8
NC_013947:6678000:6699510669951067007691260Stackebrandtia nassauensis DSM 44728 chromosome, complete genomenatural resistance-associated macrophage protein9e-1271.6
NC_009615:1601170:1609360160936016106131254Parabacteroides distasonis ATCC 8503 chromosome, complete genomeMn2+ and Fe2+ transport protein2e-1170.9
NC_014378:525717:5302595302595315241266Acetohalobium arabaticum DSM 5501 chromosome, complete genomenatural resistance-associated macrophage protein4e-1169.3
NC_011206:123791:1470461470461484161371Acidithiobacillus ferrooxidans ATCC 53993, complete genomenatural resistance-associated macrophage protein7e-1168.9
NC_009485:1604942:1640812164081216421311320Bradyrhizobium sp. BTAi1 chromosome, complete genomemanganese/divalent cation transport protein8e-1168.6
NC_017167:2203159:2212767221276722143861620Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1natural resistance-associated macrophage protein2e-1067.4
NC_009138:1544835:156588515658851566106222Herminiimonas arsenicoxydans, complete genomehypothetical protein3e-1067
NC_004193:783958:7847417847417859941254Oceanobacillus iheyensis HTE831, complete genomehypothetical protein6e-1065.9
NC_012917:833721:8515298515298527671239Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeMn2+/Fe2+ transporter, NRAMP family7e-1065.5
NC_004547:913553:9332339332339344651233Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative manganese transport protein MntH9e-1065.1
NC_012880:3748665:3767627376762737688651239Dickeya dadantii Ech703, complete genomeMn2+/Fe2+ transporter, NRAMP family1e-0964.7
NC_013421:1038500:1038569103856910398071239Pectobacterium wasabiae WPP163, complete genomeMn2+/Fe2+ transporter, NRAMP family2e-0964.3
NC_007712:2806500:285460828546082855258651Sodalis glossinidius str. 'morsitans', complete genomeputative manganese transport protein MntH2e-0964.3
NC_014551:442135:4524464524464537201275Bacillus amyloliquefaciens DSM 7, complete genomemanganese transporter8e-0962
NC_017188:419000:4298024298024310761275Bacillus amyloliquefaciens TA208 chromosome, complete genomemanganese transport protein MntH8e-0962
NC_017190:424000:4344754344754357491275Bacillus amyloliquefaciens LL3 chromosome, complete genomemanganese transporter8e-0962
NC_017191:425000:4357124357124369861275Bacillus amyloliquefaciens XH7 chromosome, complete genomemanganese transport protein MntH8e-0962
NC_016602:1994110:1999300199930020005441245Vibrio furnissii NCTC 11218 chromosome 1, complete sequencemanganese transport protein8e-0962
NC_012912:3749156:3749156374915637503911236Dickeya zeae Ech1591, complete genomeMn2+/Fe2+ transporter, NRAMP family7e-0962
NC_008571:2229369:2251967225196722531871221Gramella forsetii KT0803, complete genomemanganese transport protein MntH1e-0861.6
NC_008618:1729739:1757636175763617589191284Bifidobacterium adolescentis ATCC 15703, complete genomeH(+)-stimulated manganese uptake system protein1e-0861.2
NC_014328:3747973:3752206375220637535161311Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative manganese/divalent cation transporter4e-0859.7
NC_003106:1899691:1905075190507519062861212Sulfolobus tokodaii str. 7, complete genomehypothetical protein4e-0859.7
NC_017047:3936624:3936624393662439379281305Rahnella aquatilis HX2 chromosome, complete genomeNRAMP family Mn2+/Fe2+ transporter5e-0859.3
NC_015061:3840463:3869210386921038705141305Rahnella sp. Y9602 chromosome, complete genomeMn2+/Fe2+ transporter, NRAMP family5e-0859.3
NC_016113:1312052:1318510131851013201561647Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceMn2+ or Fe2+ transporter5e-0859.3
NC_007651:3064530:3068770306877030701281359Burkholderia thailandensis E264 chromosome I, complete sequencemanganese/iron transporter, NRAMP family1e-0758.2
NC_007434:1923000:1940997194099719423101314Burkholderia pseudomallei 1710b chromosome I, complete sequenceputative manganese transport protein MntH1e-0757.8
NC_016582:10015558:1002125710021257100225641308Streptomyces bingchenggensis BCW-1 chromosome, complete genomemanganese transport protein MntH3e-0757
NC_013740:2218215:2219792221979222210211230Acidaminococcus fermentans DSM 20731, complete genomenatural resistance-associated macrophage protein5e-0756.2
NC_015555:211935:2302502302502315391290Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeManganese transport protein mntH6e-0755.8
NC_015499:1493500:1498389149838914996481260Thermodesulfobium narugense DSM 14796 chromosome, complete genomenatural resistance-associated macrophage protein1e-0655.1
NC_010511:4313769:432839043283904328545156Methylobacterium sp. 4-46 chromosome, complete genome1e-0655.1
NC_014209:761832:7708247708247720861263Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,natural resistance-associated macrophage protein1e-0654.7
NC_015738:220000:2390992390992403491251Eggerthella sp. YY7918, complete genomehypothetical protein3e-0653.5
NC_014532:2989185:3007981300798130092731293Halomonas elongata DSM 2581, complete genomeK03322 metal ion transporter, Nramp family3e-0653.1
NC_011593:507438:5120825120825133921311Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,natural resistance-associated macrophage protein9e-0652