Pre_GI: BLASTP Hits

Some Help

Query: NC_007953:504939:510311 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 510311, End: 510556, Length: 246

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010557:316000:321153321153321935783Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceDak phosphatase4e-1579.7
NC_014118:2316000:2331875233187523335781704Burkholderia sp. CCGE1002 chromosome chromosome 2, completedihydroxyacetone kinase, DhaK subunit7e-1062.8
NC_012032:1827244:183000118300011830648648Chloroflexus sp. Y-400-fl, complete genomedihydroxyacetone kinase, L subunit4e-0753.1
NC_010175:1825878:182863518286351829282648Chloroflexus aurantiacus J-10-fl, complete genomedihydroxyacetone kinase, L subunit4e-0753.1
NC_010321:562494:576099576099576737639Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completedihydroxyacetone kinase subunit L1e-0652
NC_014964:557910:571514571514572152639Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completedihydroxyacetone kinase, L subunit1e-0652