Pre_GI: BLASTP Hits

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Query: NC_007953:314872:332330 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 332330, End: 332698, Length: 369

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015383:229036:2359922359922370321041Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequenceintegrase, catalytic region6e-1476.3
NC_015381:2405446:2413309241330924148471539Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative transposase6e-1476.3
NC_008782:3167440:3218129321812932196671539Acidovorax sp. JS42, complete genomeIntegrase, catalytic region3e-1270.5
NC_007948:360199:3601993601993617461548Polaromonas sp. JS666, complete genomeIntegrase, catalytic region1e-1065.5
NC_015136:1101725:1107959110795911094971539Burkholderia sp. CCGE1001 chromosome 1, complete sequenceintegrase catalytic subunit7e-1062.8
NC_007973:3240866:3247826324782632493641539Ralstonia metallidurans CH34 chromosome 1, complete sequenceIntegrase, catalytic region3e-0960.5
NC_010002:2933909:2940968294096829425061539Delftia acidovorans SPH-1, complete genomeIntegrase catalytic region3e-0960.5
NC_015563:1951368:1986783198678319883211539Delftia sp. Cs1-4 chromosome, complete genomeintegrase catalytic subunit4e-0960.1
NC_013446:1648556:1684363168436316859011539Comamonas testosteroni CNB-2, complete genomeIntegrase, catalytic region4e-0960.1
NC_008340:1733735:1746503174650317480201518Alkalilimnicola ehrlichei MLHE-1, complete genomeIntegrase, catalytic region5e-0960.1
NC_008340:1733735:1742504174250417440211518Alkalilimnicola ehrlichei MLHE-1, complete genomeIntegrase, catalytic region5e-0960.1
NC_008789:1393526:1413395141339514149271533Halorhodospira halophila SL1, complete genomeIntegrase, catalytic region1e-0755.1
NC_020260:882307:903547903547904272726Cronobacter sakazakii Sp291, complete genomehypothetical protein6e-0649.7