Pre_GI: BLASTP Hits

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Query: NC_007953:314872:323595 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 323595, End: 324155, Length: 561

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012791:2052923:208443720844372084976540Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein1e-21102
NC_014720:383587:401557401557402012456Caldicellulosiruptor kronotskyensis 2002 chromosome, completehypothetical protein1e-1479.7
NC_012034:2676943:267897126789712679426456Anaerocellum thermophilum DSM 6725, complete genomehypothetical protein1e-1479.3
NC_014652:325109:343070343070343525456Caldicellulosiruptor hydrothermalis 108 chromosome, completehypothetical protein5e-1477.4
NC_015152:2622000:262943726294372629970534Spirochaeta sp. Buddy chromosome, complete genomehypothetical protein5e-1477.4
NC_014657:2283176:228872122887212289176456Caldicellulosiruptor owensensis OL chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase8e-1373.6
NC_014392:2350577:235770723577072358162456Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomehypothetical protein2e-1272
NC_007517:2515870:253016225301622530650489Geobacter metallireducens GS-15, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase3e-1271.6
NC_015152:2622000:262803226280322628511480Spirochaeta sp. Buddy chromosome, complete genomelactoylglutathione lyase-like protein6e-1167.4