Pre_GI: BLASTP Hits

Some Help

Query: NC_007953:1434705:1453347 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 1453347, End: 1454582, Length: 1236

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011001:854713:8578308578308590861257Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative cNMP-binding domain-containing protein1e-156553
NC_008543:582129:5852485852485864981251Burkholderia cenocepacia HI2424 chromosome 2, complete sequencecyclic nucleotide-binding protein2e-156552
NC_015957:10403997:104039971040399710404671675Streptomyces violaceusniger Tu 4113 chromosome, complete genomeCrp/Fnr family transcriptional regulator1e-1068.2
NC_013510:5499447:550096255009625501648687Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, Crp/Fnr family1e-1068.2
NC_008711:3701635:370163537016353702312678Arthrobacter aurescens TC1, complete genomeputative cyclic nucleotide-binding domain2e-0964.3
NC_013530:3365742:336760333676033368280678Xylanimonas cellulosilytica DSM 15894, complete genometranscriptional regulator, Crp/Fnr family2e-0860.8
NC_010505:4820000:4822001482200148232811281Methylobacterium radiotolerans JCM 2831, complete genomecyclic nucleotide-binding protein3e-0757
NC_015588:2939747:294064829406482941325678Isoptericola variabilis 225 chromosome, complete genometranscriptional regulator, Crp/Fnr family2e-0757
NC_007626:506532:525188525188526174987Magnetospirillum magneticum AMB-1, complete genomeCheY-like receiver4e-0756.2
NC_007643:578808:581834581834582223390Rhodospirillum rubrum ATCC 11170, complete genomeCyclic nucleotide-binding domain (cNMP-BD) protein7e-0755.5
NC_010337:1999405:2015888201588820175731686Heliobacterium modesticaldum Ice1, complete genomecyclic nucleotide-binding transcriptional regulator, putative1e-0654.7
NC_020126:5470090:549252754925275493210684Myxococcus stipitatus DSM 14675, complete genomeCrp/Fnr family transcriptional regulator6e-0652.4