Pre_GI: BLASTP Hits

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Query: NC_007952:495000:511986 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 511986, End: 512798, Length: 813

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017030:3381500:339251133925113393194684Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein3e-97354
NC_008009:1264791:126941412694141270121708Acidobacteria bacterium Ellin345, complete genomehypothetical protein1e-82306
NC_007510:1921251:194651319465131947235723Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein1e-79296
NC_007974:2048000:205312620531262053773648Ralstonia metallidurans CH34 chromosome 2, complete sequencehypothetical protein3e-75281
NC_010002:4175809:417647241764724177455984Delftia acidovorans SPH-1, complete genomeconserved hypothetical protein-like protein4e-75281
NC_015563:3401867:342100834210083421811804Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein2e-74279
NC_013406:4323338:433622243362224336935714Paenibacillus sp. Y412MC10 chromosome, complete genomehypothetical protein6e-64244
NC_015957:6029542:602954260295426030270729Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein2e-55216
NC_013169:612456:642513642513643241729Kytococcus sedentarius DSM 20547, complete genomehypothetical protein4e-54211
NC_008595:2215244:221910722191072219826720Mycobacterium avium 104, complete genomehypothetical protein1e-52206
NC_007974:138176:155427155427156131705Ralstonia metallidurans CH34 chromosome 2, complete sequencehypothetical protein7e-50197
NC_007510:1921251:195059919505991951276678Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein9e-49193
NC_015563:3401867:342249334224933423188696Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein5e-28124