Pre_GI: BLASTP Hits

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Query: NC_007952:3196085:3214122 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3214122, End: 3215018, Length: 897

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014117:442616:464955464955465755801Burkholderia sp. CCGE1002 chromosome chromosome 1, completehistone family protein nucleoid-structuring protein H-NS2e-50199
NC_010625:1370462:138969313896931390457765Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehistone family protein nucleoid-structuring protein H-NS2e-44179
NC_015137:2582467:260836226083622609213852Burkholderia sp. CCGE1001 chromosome 2, complete sequencehistone family protein nucleoid-structuring protein H-NS6e-42171
NC_009254:745706:771167771167771466300Burkholderia vietnamiensis G4 chromosome 3, complete sequencehistone family protein nucleoid-structuring protein H-NS8e-1374.7
NC_007509:71954:920319203192321291Burkholderia sp. 383 chromosome 3, complete sequenceHistone-like nucleoid-structuring protein H-NS1e-1170.9
NC_009254:700891:714526714526714825300Burkholderia vietnamiensis G4 chromosome 3, complete sequencehistone family protein nucleoid-structuring protein H-NS3e-1169.3
NC_010087:460591:474831474831475130300Burkholderia multivorans ATCC 17616 chromosome 3, completehistone family protein nucleoid-structuring protein H-NS3e-1169.3
NC_010801:421906:449728449728450027300Burkholderia multivorans ATCC 17616 chromosome 3, completeputative histone-like nucleoid-structuring protein H-NS3e-1169.3
NC_010512:1015557:103187110318711032170300Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencehistone family protein nucleoid-structuring protein H-NS5e-1168.6
NC_007974:2097334:216816821681682168482315Ralstonia metallidurans CH34 chromosome 2, complete sequencehistone-like nucleoid-structuring protein H-NS1e-1067.8
NC_010515:2111691:213317021331702133472303Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencehistone family protein nucleoid-structuring protein H-NS1e-1067.4
NC_008061:190287:210172210172210474303Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencehistone-like nucleoid-structuring protein H-NS1e-1067.4
NC_015724:166246:1696151696151707271113Cupriavidus necator N-1 plasmid BB2p, complete sequencehistone-like nucleoid-structuring protein H-NS8e-1064.7
NC_010515:2691000:271220027122002712499300Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencehistone family protein nucleoid-structuring protein H-NS8e-0961.2
NC_007509:1043602:106410710641071064406300Burkholderia sp. 383 chromosome 3, complete sequenceHistone-like nucleoid-structuring protein H-NS2e-0860.1
NC_015382:266000:267230267230267520291Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequencehistone-like nucleoid-structuring protein H-NS2e-0860.1
NC_010002:4326509:433399143339914334266276Delftia acidovorans SPH-1, complete genomehistone family protein nucleoid-structuring protein H-NS2e-0859.7
NC_007511:2072838:209842320984232098713291Burkholderia sp. 383 chromosome 2, complete sequenceHistone-like nucleoid-structuring protein H-NS6e-0858.5
NC_015563:3203012:324450632445063244781276Delftia sp. Cs1-4 chromosome, complete genomehistone family protein nucleoid-structuring protein H-NS7e-0858.2
NC_008391:404388:429528429528429815288Burkholderia cepacia AMMD chromosome 2, complete sequencehistone family protein nucleoid-structuring protein H-NS7e-0858.2
NC_011002:703194:719764719764720060297Burkholderia cenocepacia J2315 chromosome 3, complete sequenceputative H-NS family DNA-binding protein1e-0757.8
NC_010087:319063:361829361829362215387Burkholderia multivorans ATCC 17616 chromosome 3, completehistone family protein nucleoid-structuring protein H-NS1e-0757.4
NC_010801:550270:562643562643562939297Burkholderia multivorans ATCC 17616 chromosome 3, completeputative histone-like nucleoid-structuring protein H-NS1e-0757.4
NC_007651:3064530:310862331086233108958336Burkholderia thailandensis E264 chromosome I, complete sequenceDNA-binding protein BprA6e-0755.1
NC_015376:1752883:177066117706611770951291Burkholderia gladioli BSR3 chromosome chromosome 2, completeH-NS histone family protein6e-0755.1
NC_010002:4508467:452542145254214525708288Delftia acidovorans SPH-1, complete genomehistone family protein nucleoid-structuring protein H-NS2e-0653.1
NC_010002:2110953:211484721148472115134288Delftia acidovorans SPH-1, complete genomehistone family protein nucleoid-structuring protein H-NS2e-0653.1
NC_009254:329700:335710335710336003294Burkholderia vietnamiensis G4 chromosome 3, complete sequencehistone family protein nucleoid-structuring protein H-NS3e-0652.8
NC_015563:3074691:308634130863413086628288Delftia sp. Cs1-4 chromosome, complete genomehistone family protein nucleoid-structuring protein H-NS4e-0652.4
NC_009074:1555500:156836315683631568644282Burkholderia pseudomallei 668 chromosome I, complete sequenceputative DNA-binding protein5e-0652
NC_007434:1923000:194505019450501945331282Burkholderia pseudomallei 1710b chromosome I, complete sequenceH-NS histone family protein5e-0652
NC_006350:2427000:243150524315052431786282Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative regulatory protein5e-0652
NC_009076:1566500:157806315780631578344282Burkholderia pseudomallei 1106a chromosome I, complete sequenceH-NS histone family protein5e-0652
NC_007651:3064530:306727630672763067557282Burkholderia thailandensis E264 chromosome I, complete sequenceH-NS histone family protein5e-0652
NC_010515:1618093:162905216290521629357306Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencehistone family protein nucleoid-structuring protein H-NS9e-0651.2