Pre_GI: BLASTP Hits

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Query: NC_007952:3196085:3207202 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3207202, End: 3207687, Length: 486

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009256:1782000:178450317845031784961459Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein8e-30129
NC_009254:637952:652715652715653173459Burkholderia vietnamiensis G4 chromosome 3, complete sequencehypothetical protein8e-30129
NC_009254:637952:637952637952638407456Burkholderia vietnamiensis G4 chromosome 3, complete sequencehypothetical protein2e-21101
NC_015377:86847:983969839698800405Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequencehypothetical protein2e-2098.2
NC_009075:587441:593459593459593974516Burkholderia pseudomallei 668 chromosome II, complete sequencehypothetical protein9e-2095.9
NC_008061:2582000:260214226021422602621480Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencehypothetical protein9e-1785.9
NC_015137:2616222:263555526355552636070516Burkholderia sp. CCGE1001 chromosome 2, complete sequencehypothetical protein6e-1580.1
NC_014118:2316000:232881623288162329277462Burkholderia sp. CCGE1002 chromosome chromosome 2, completehypothetical protein2e-1064.7
NC_010681:221416:238386238386238841456Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, fis family9e-1062.8
NC_015381:1558263:156943115694311569856426Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein4e-0960.5
NC_009254:74000:798507985080476627Burkholderia vietnamiensis G4 chromosome 3, complete sequencehypothetical protein2e-0858.2
NC_006351:2759708:276642127664212766645225Burkholderia pseudomallei K96243 chromosome 2, complete sequence3e-0857.4
NC_012720:114489:132192132192132617426Burkholderia glumae BGR1 plasmid bglu_3p, complete sequencehypothetical protein1e-0755.5