Pre_GI: BLASTP Hits

Some Help

Query: NC_007952:3037590:3054806 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3054806, End: 3056176, Length: 1371

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015593:2271097:2283649228364922849801332Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeMmgE/PrpD family protein1e-1688.2
NC_009454:2502724:2526950252695025283381389Pelotomaculum thermopropionicum SI, complete genomehypothetical protein3e-1686.7
NC_014098:1258559:1269776126977612711551380Bacillus tusciae DSM 2912 chromosome, complete genomeMmgE/PrpD family protein5e-1686.3
NC_008786:1767315:1770776177077617722241449Verminephrobacter eiseniae EF01-2, complete genomeMmgE/PrpD family protein2e-1480.5
NC_008268:361424:3711593711593723821224Rhodococcus sp. RHA1, complete genomeMmgE/PrpD family3e-1480.1
NC_007511:1300978:1315038131503813164081371Burkholderia sp. 383 chromosome 2, complete sequenceMmgE/PrpD family protein1e-1377.8
NC_010625:1465603:1473555147355514749371383Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceMmgE/PrpD family protein6e-1375.9
NC_018000:1914945:1923979192397919253461368Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein5e-1272.8
NC_016111:6175975:6190505619050561919531449Streptomyces cattleya NRRL 8057, complete genomeMmgE/PrpD family protein1e-1171.6
NC_014374:1013184:1028753102875310301411389Acidilobus saccharovorans 345-15 chromosome, complete genome2-methylcitrate dehydratase1e-1171.2
NC_000854:1342983:1358977135897713603531377Aeropyrum pernix K1, complete genome2-methylcitrate dehydratase5e-1169.7
NC_002928:3781657:3782461378246137839031443Bordetella parapertussis 12822, complete genomehypothetical protein7e-1168.9
NC_015434:3581001:3581001358100135824251425Verrucosispora maris AB-18-032 chromosome, complete genomeMmgE/PrpD family protein6e-0962.4
NC_014623:4662990:4677227467722746786781452Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein7e-0962.4
NC_020541:2694836:2696120269612026975081389Rhodanobacter sp. 2APBS1, complete genomeuncharacterized protein involved in propionate catabolism1e-0861.6
NC_015573:3243613:3251366325136632527421377Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeMmgE/PrpD family protein4e-0860.1
NC_012779:2064582:2072198207219820736011404Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-0758.2
NC_010625:1415500:1429866142986614312481383Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceMmgE/PrpD family protein2e-0757.8
NC_016641:4653889:4672754467275446741301377Paenibacillus terrae HPL-003 chromosome, complete genomeMmgE/PrpD family protein1e-0655.1
NC_011283:1811000:1890556189055618918991344Klebsiella pneumoniae 342 chromosome, complete genomeMmgE/PrpD family protein2e-0654.3