Pre_GI: BLASTP Hits

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Query: NC_007952:1934249:1937851 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 1937851, End: 1938684, Length: 834

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015381:766355:770359770359771228870Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-117422
NC_006348:2372945:240540524054052406241837Burkholderia mallei ATCC 23344 chromosome 1, complete sequenceyafJ protein, putative2e-115415
NC_008836:1072721:110518111051811106017837Burkholderia mallei NCTC 10229 chromosome II, complete sequenceputative glutamine amidotransferase2e-115415
NC_007434:3588081:362054236205423621378837Burkholderia pseudomallei 1710b chromosome I, complete sequenceYafJ2e-115415
NC_009076:3179662:321212232121223212958837Burkholderia pseudomallei 1106a chromosome I, complete sequenceputative glutamine amidotransferase2e-115415
NC_009080:2123987:215644721564472157283837Burkholderia mallei NCTC 10247 chromosome II, complete sequenceputative glutamine amidotransferase2e-115415
NC_008785:516500:517517517517518353837Burkholderia mallei SAVP1 chromosome II, complete sequenceputative glutamine amidotransferase2e-115415
NC_009074:3163362:319582331958233196659837Burkholderia pseudomallei 668 chromosome I, complete sequenceputative glutamine amidotransferase2e-115415
NC_006350:3329477:336192933619293362774846Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein2e-115415
NC_011000:3493575:350965335096533510486834Burkholderia cenocepacia J2315 chromosome 1, complete sequencefamily C44 cysteine peptidase7e-113406
NC_008060:341851:345232345232346065834Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceglutamine amidotransferase, class-II1e-112405
NC_007973:1889076:188907618890761889915840Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein5e-106384
NC_016002:2652500:266067026606702661431762Pseudogulbenkiania sp. NH8B, complete genomeglutamine amidotransferase, class-II1e-101369
NC_008278:5855401:586440158644015865231831Frankia alni ACN14a, complete genomeGlutamine amidotransferases class-II3e-66251
NC_011757:4293000:429451342945134295298786Methylobacterium chloromethanicum CM4, complete genomeglutamine amidotransferase class-II6e-45181
NC_012988:4633930:463767146376714638456786Methylobacterium extorquens DM4, complete genomeaminohydrolase/amidotransferase8e-45180
NC_012808:4235567:423930942393094240094786Methylobacterium extorquens AM1, complete genomeputative aminohydrolase/amidotransferase8e-45180
NC_010172:4185904:419096341909634191748786Methylobacterium extorquens PA1, complete genomeglutamine amidotransferase class-II8e-45180
NC_005125:4557889:456733945673394568136798Gloeobacter violaceus PCC 7421, complete genomehypothetical protein9e-26117
NC_010572:802269:825210825210825965756Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein6e-22104
NC_009675:2623339:262468026246802625444765Anaeromyxobacter sp. Fw109-5 chromosome, complete genomeglutamine amidotransferase6e-22104
NC_020126:3979792:398486639848663985702837Myxococcus stipitatus DSM 14675, complete genomeclass II glutamine amidotransferase domain-containing protein1e-0757.4
NC_013665:2132000:215671221567122157410699Methanocella paludicola SANAE, complete genomehypothetical protein3e-0652.4
NC_010612:5403000:541737154173715418243873Mycobacterium marinum M, complete genomehypothetical protein5e-0652
NC_014623:7133149:7133149713314971349151767Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein5e-0652