Pre_GI: BLASTP Hits

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Query: NC_007952:1587500:1595065 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 1595065, End: 1595517, Length: 453

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014310:2017927:2027075202707520284061332Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein5e-1683.2
NC_005773:5684000:5690781569078156920851305Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein7e-1682.8
NC_014323:625155:6346966346966359161221Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein3e-1270.9
NC_012912:2901021:292155529215552922445891Dickeya zeae Ech1591, complete genomehypothetical protein1e-0652
NC_008752:3511006:352222135222213522661441Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein4e-0650.4