Pre_GI: BLASTP Hits

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Query: NC_007951:740500:761595 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 761595, End: 762878, Length: 1284

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014207:1366766:1383222138322213845231302Methylotenera sp. 301 chromosome, complete genomeamine oxidase0644
NC_007298:1824335:1831333183133318326431311Dechloromonas aromatica RCB, complete genomehypothetical protein0643
NC_009379:304222:3200073200073212931287Polynucleobacter sp. QLW-P1DMWA-1, complete genomeamine oxidase2e-165582
NC_015942:2943127:2957304295730429585901287Acidithiobacillus ferrivorans SS3 chromosome, complete genomeamine oxidase5e-161567
NC_008789:1669082:1688140168814016894471308Halorhodospira halophila SL1, complete genomeamine oxidase3e-138492
NC_015508:251354:2622782622782635611284Agrobacterium sp. H13-3 chromosome linear, complete sequenceFAD dependent oxidoreductase4e-109395
NC_015593:2914384:2930595293059529319561362Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeamine oxidase4e-108391
NC_003919:4258788:4262187426218742634731287Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein6e-108391
NC_017267:3982619:3991576399157639928831308Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completephytoene desaturase2e-106386
NC_008554:156744:1711821711821724801299Syntrophobacter fumaroxidans MPOB, complete genomeamine oxidase3e-106385
NC_015422:2326942:2335308233530823366391332Alicycliphilus denitrificans K601 chromosome, complete genomeamine oxidase6e-52205
NC_014910:2045088:2053454205345420547851332Alicycliphilus denitrificans BC chromosome, complete genomeamine oxidase1e-51204
NC_005773:1135374:1144428114442811457291302Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein8e-51201
NC_008313:3112440:3121308312130831226121305Ralstonia eutropha H16 chromosome 1, complete sequenceprotoporphyrinogen oxidase1e-50201
NC_014960:2141345:2144934214493421462231290Anaerolinea thermophila UNI-1, complete genomeputative oxidoreductase2e-39164
NC_003552:4637764:466035546603554660660306Methanosarcina acetivorans C2A, complete genomehypothetical protein6e-0755.8