Pre_GI: BLASTP Hits

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Query: NC_007951:740500:758744 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 758744, End: 761104, Length: 2361

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014207:1366766:1373588137358813761312544Methylotenera sp. 301 chromosome, complete genomehypothetical protein7e-75282
NC_014364:667841:7092667092667124363171Spirochaeta smaragdinae DSM 11293 chromosome, complete genomehypothetical protein1e-34149
NC_015942:2943127:2954058295405829562772220Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein3e-1584.7
NC_016589:2312570:2341785234178523441392355Burkholderia sp. YI23 chromosome 1, complete sequencehypothetical protein2e-1068.6
NC_015499:309394:325109325109325714606Thermodesulfobium narugense DSM 14796 chromosome, complete genomehypothetical protein1e-0655.8