Pre_GI: BLASTP Hits

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Query: NC_007951:570500:600610 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 600610, End: 601023, Length: 414

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010676:2621496:263681626368162637241426Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, MarR family2e-39160
NC_007509:3668:524005240052825426Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, MarR family9e-33138
NC_012914:3315947:332236033223603322767408Paenibacillus sp. JDR-2, complete genometranscriptional regulator, MarR family1e-23108
NC_011894:2184956:219789421978942198340447Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, MarR family5e-1682.8