Pre_GI: BLASTP Hits

Some Help

Query: NC_007951:4741620:4754434 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4754434, End: 4755552, Length: 1119

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016002:1975000:2002567200256720036881122Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein6e-57221
NC_014614:2643203:2642146264214626432101065Clostridium sticklandii, complete genomehypothetical protein2e-54213
NC_008686:1960034:1969844196984419709681125Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein4e-50198
NC_005773:694990:7188667188667199931128Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein1e-48193
NC_013037:1587673:1600372160037216014301059Dyadobacter fermentans DSM 18053, complete genomehypothetical protein4e-1995.9
NC_014738:2011554:2025739202573920267941056Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,hypothetical protein1e-1894
NC_020125:1802000:181110918111091812026918Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein2e-1790.1
NC_008577:1455000:147323714732371474130894Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein6e-0755.5