Pre_GI: BLASTP Hits

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Query: NC_007951:4741620:4753691 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4753691, End: 4754428, Length: 738

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010943:2499092:250671425067142507349636Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane protein1e-1893.6
NC_016002:1975000:200192920019292002567639Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein6e-1891.3
NC_005773:694990:718229718229718882654Pseudomonas syringae pv. phaseolicola 1448A, complete genomeputative pancortin-31e-1687
NC_008686:1960034:197095819709581971539582Paracoccus denitrificans PD1222 chromosome 1, complete sequenceputative pancortin-32e-1582.8
NC_011832:913994:923798923798924436639Candidatus Methanosphaerula palustris E1-9c, complete genomehypothetical protein2e-0962.8
NC_014614:2643203:264320326432032643808606Clostridium sticklandii, complete genomeputative pancortin-32e-0962.4
NC_017068:1788235:180574118057411806268528Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein4e-0962
NC_015970:19850:192691926919853585Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, completehypothetical protein2e-0756.2