Pre_GI: BLASTP Hits

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Query: NC_007951:4608560:4616814 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4616814, End: 4617893, Length: 1080

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007645:5160133:5177561517756151786521092Hahella chejuensis KCTC 2396, complete genomepredicted hydrolase (metallo-beta-lactamase superfamily)1e-64247
NC_008577:2402165:2435122243512224362131092Shewanella sp. ANA-3 chromosome 1, complete sequencehydrolase (metallo-beta-lactamase superfamily)7e-61234
NC_009138:3153576:3158751315875131598091059Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-54213
NC_010002:3002354:3007770300777030088851116Delftia acidovorans SPH-1, complete genomehypothetical protein2e-51202
NC_020181:5182568:518840551884055189313909Enterobacter aerogenes EA1509E, complete genomeFIG00700330: hypothetical protein1e-43177
NC_019970:1991944:199194419919441992897954Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeputative hydrolase (metallo-beta-lactamase superfamily)3e-0859.7
NC_015555:863173:879509879509880426918Thermoanaerobacterium xylanolyticum LX-11 chromosome, completebeta-lactamase domain protein2e-0653.9
NC_015573:893862:9200839200839212731191Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein3e-0653.5
NC_018870:2316499:2317535231753523185451011Thermacetogenium phaeum DSM 12270 chromosome, complete genomebeta-lactamase-like protein4e-0652.4
NC_007644:1293701:1297449129744912984951047Moorella thermoacetica ATCC 39073, complete genomeBeta-lactamase-like9e-0651.6