Pre_GI: BLASTP Hits

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Query: NC_007951:4608560:4615954 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4615954, End: 4616817, Length: 864

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013720:361785:385483385483386247765Pirellula staleyi DSM 6068, complete genomehypothetical protein4e-29128
NC_009138:3153576:315794531579453158745801Herminiimonas arsenicoxydans, complete genomehypothetical protein3e-28125
NC_010002:3002354:301333030133303014118789Delftia acidovorans SPH-1, complete genomehypothetical protein4e-23108
NC_012811:410776:425285425285426103819Methylobacterium extorquens AM1 megaplasmid, complete sequencehypothetical protein5e-1891.7
NC_015312:5876957:588732658873265887847522Pseudonocardia dioxanivorans CB1190 chromosome, complete genome4e-1582.4
NC_014366:1435785:145072414507241451467744Gamma proteobacterium HdN1, complete genomehypothetical protein3e-1375.9