Pre_GI: BLASTP Hits

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Query: NC_007951:4576825:4593235 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4593235, End: 4593594, Length: 360

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009256:176403:190007190007190342336Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein3e-29127
NC_008060:3155133:318331631833163183666351Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencehypothetical protein6e-29125
NC_010625:1602191:161092616109261611252327Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein8e-23105
NC_010678:900389:921848921848922150303Ralstonia pickettii 12J chromosome 2, complete sequencehypothetical protein2e-1374.3
NC_013959:826868:834411834411835184774Sideroxydans lithotrophicus ES-1 chromosome, complete genomehypothetical protein6e-1372.8
NC_013959:1555799:157221915722191572590372Sideroxydans lithotrophicus ES-1 chromosome, complete genomehypothetical protein1e-1272
NC_015137:2616222:265088626508862651212327Burkholderia sp. CCGE1001 chromosome 2, complete sequencehypothetical protein1e-1271.6
NC_011662:1:282932829328685393Thauera sp. MZ1T, complete genomehypothetical protein1e-1168.6
NC_010681:4299979:432294643229464323311366Burkholderia phytofirmans PsJN chromosome 1, complete sequencehypothetical protein8e-1165.9
NC_012857:41946:545575455754886330Ralstonia pickettii 12D chromosome 2, complete genomehypothetical protein3e-1063.9
NC_010678:900389:913000913000913329330Ralstonia pickettii 12J chromosome 2, complete sequencehypothetical protein3e-1063.9
NC_007974:2048000:206313820631382063359222Ralstonia metallidurans CH34 chromosome 2, complete sequencehypothetical protein9e-0958.9
NC_012811:227541:230686230686231033348Methylobacterium extorquens AM1 megaplasmid, complete sequencehypothetical protein9e-0855.5