Pre_GI: BLASTP Hits

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Query: NC_007951:3655088:3685757 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 3685757, End: 3686950, Length: 1194

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015381:1173603:1175983117598311771641182Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-157555
NC_008344:1364142:1367258136725813684181161Nitrosomonas eutropha C91, complete genomehypothetical protein4e-92338
NC_015740:2614317:2618825261882526199641140Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein5e-86318
NC_009439:2337024:2351124235112423522661143Pseudomonas mendocina ymp, complete genomehypothetical protein8e-84310
NC_015410:2838132:2845351284535128464931143Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein7e-75281
NC_016901:2542110:2563764256376425649421179Shewanella baltica OS678 chromosome, complete genomehypothetical protein4e-73275
NC_007298:2170181:2186460218646021875421083Dechloromonas aromatica RCB, complete genomehypothetical protein7e-68258
NC_008786:3045770:3047242304724230485221281Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein2e-47189