Pre_GI: BLASTP Hits

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Query: NC_007951:3655088:3663667 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 3663667, End: 3664659, Length: 993

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014641:20103:297502975030742993Achromobacter xylosoxidans A8 plasmid pA81, complete sequenceNMT1/THI5 like family protein 60649
NC_015727:1294532:131175313117531312694942Cupriavidus necator N-1 plasmid BB1p, complete sequenceNMT1/THI5 like family protein 63e-65248
NC_007948:360199:377357377357378289933Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 34e-58225
NC_008254:3143770:317461131746113175606996Mesorhizobium sp. BNC1, complete genomeABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like2e-23110
NC_008254:3143770:3176214317621431772391026Mesorhizobium sp. BNC1, complete genomeABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like1e-1480.9
NC_015565:1163148:1169787116978711707941008Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completealiphatic sulfonates family ABC transporter periplasmic ligand-binding protein6e-0755.1